Gene Information

Name : expA (ECA2882)
Accession : YP_050973.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3230467 - 3231123 bp
Length : 657 bp
Strand : -
Note : in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate v

DNA sequence : 
TTGATTAGCGTTTTTCTTGTTGATGACCATGAACTGGTGCGGGCAGGGATACGACGCATTCTTGACGATATCAAAGGTCT
GAAAGTAGTTGGTGAAGCATGCTGTGGTGAAGATGCCGTGAAATGGTGCCGAAGCAATGATGTTGACGTTGTTCTGATGG
ACATGAGCATGCCGGGCATCGGTGGGCTTGAAGCAACGCGTAAAATTTTGCGGTTTACTCCAGATATAAAAGTCATCATG
CTCACCATTTATACGGAAAATCCATTACCCGCTAAAGTGATGCAGGCGGGTGCCGCGGGATATGTTAGTAAAGCTGCTGC
CCCTCAGGAAGTGATCTCCGCCATTCGAGCCGTACATGCAGGGAAACGGTATATTGCTTCTGATATTGCTCAACAGATGG
CATTGAGCCAGTTGGAGCCGCAGACGGATGCGCCGCTTGAGTGTTTGTCTGAACGCGAATTACAGATTATGCTAATGATA
ACGAAGGGGCAAAAAGTGACTGAAATCTCAGAACAGCTCAATCTTAGCCCTAAAACAGTGAACAGCTATCGTTACCGCAT
GTTCAGTAAGCTGAATATTAACGGTGACGTAGAATTGACTCATCTGGCTATCAAGCACGGGCTTTTTACCGCGGAGACAT
TGTTAAGTAGTGAGTGA

Protein sequence : 
MISVFLVDDHELVRAGIRRILDDIKGLKVVGEACCGEDAVKWCRSNDVDVVLMDMSMPGIGGLEATRKILRFTPDIKVIM
LTIYTENPLPAKVMQAGAAGYVSKAAAPQEVISAIRAVHAGKRYIASDIAQQMALSQLEPQTDAPLECLSERELQIMLMI
TKGQKVTEISEQLNLSPKTVNSYRYRMFSKLNINGDVELTHLAIKHGLFTAETLLSSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-40 47
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-40 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
expA YP_050973.1 response regulator VFG1889 Protein 4e-47 49