|
Name : tdrA (ECA0276) Accession : YP_048403.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : DNA-binding transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 324544 - 325479 bp Length : 936 bp Strand : - Note : Similar to Serratia marcescens temperature-dependent regulator A TdrA SWALL:Q8VUI0 (EMBL:AB077386) (303 aa) fasta scores: E(): 1.9e-100, 82.5% id in 303 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical transcript DNA sequence : ATGGAAAGACTAAAGAGTATGTCGGTGTTTGCCCGCGTGGTGGAATGTGGTTCTTTTACCGCCGCCGCACGCCAGTTGCA GATGAGCGTATCCGCCGTCAGCCAGACCGTCTCCAAGCTTGAAGATGAACTACAGATTAAGCTGCTGAACCGCAGTACGC GCAGTATTGGTCTGACGGAAGCGGGAAAAATTTACTATCACGGCTGCCGTAGAATGCTACATGAAGCTCATGAGGTACAC GAACAGCTTTATGCCTTCAACAACACGCCGATCGGCACGCTACGCATTGGTAGTTCGTCTACCATGGCGCAGAATGTGTT ATCCACCATGACTGCCGCGATGCTGAAGGAATATCCTGGTTTGTCCGTCAATCTGGTCACCGGCATTCCGGCTCCCGACC TGATCGCCGACGGACTGGATATCGTTATCCGCGTCGGTGCACTACAGGATTCCACCCTGTTTTCGAAACGTTTAGGCTCG ATGCCGATGGTGGTATGTGCCGCGAAAAGCTATCTGGCGCAGCACGGCACGCCGGATAAGCCAGCAGATATGGTGAATTT TTCCTGGCTGGAATACAGCGTGCGGCCCGACAGTGAATTCGAACTGATTGCACCGGAAGGCATTTCGACCCGCGTCACAC CACAGGGGCGCTTTGTCACCAACGATCCGCAAACGCTGGTACGCTGGCTCAAGATCGGAGCGGGTATCGCGTATATTCCG CTCATGTGGATTGTGGACGAAATCAATCGTGGCGAAATCGAGATTCTATTCAACCGCTACCACTCCGATCCGCGCCCGGT CTACGCGCTTTACACCCGCAAAGACAACCTGCCGCTAAAAGTACAGGTCTGCATTAACTATATGACGGAATACTTCAAGA ACGTCGCCCTGACATATCAAGGCTATCGGCAGGATCATGGCGAGGACAAAAAGTAG Protein sequence : MERLKSMSVFARVVECGSFTAAARQLQMSVSAVSQTVSKLEDELQIKLLNRSTRSIGLTEAGKIYYHGCRRMLHEAHEVH EQLYAFNNTPIGTLRIGSSSTMAQNVLSTMTAAMLKEYPGLSVNLVTGIPAPDLIADGLDIVIRVGALQDSTLFSKRLGS MPMVVCAAKSYLAQHGTPDKPADMVNFSWLEYSVRPDSEFELIAPEGISTRVTPQGRFVTNDPQTLVRWLKIGAGIAYIP LMWIVDEINRGEIEILFNRYHSDPRPVYALYTRKDNLPLKVQVCINYMTEYFKNVALTYQGYRQDHGEDKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcaR1 | CAI77370.1 | putative lysR-family transcriptional regulator | Not tested | tc-PAIYe | Protein | 4e-130 | 84 |
