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Name : vgrG (ECA2867) Accession : YP_050958.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : RHS accessory genetic element Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 3205452 - 3207311 bp Length : 1860 bp Strand : + Note : Similar to Photorhabdus luminescens VgrG SWALL:AAN64196 (EMBL:AY144117) (631 aa) fasta scores: E(): 2.8e-128, 53.96% id in 606 aa, and to Yersinia pestis RHS accessory genetic element ypo3606 or y0268 SWALL:Q8ZB23 (EMBL:AJ414158) (800 aa) fasta scores: E( DNA sequence : GTGTTCATCACGGGACGCGAGGGAATAAACGTGGCAAACAGTACAGGATTACAGTTCACGGTAAAGGTCGGTGCATTGCC CGCCTCGACCTTTGCCGTGGTGGATTTTCAGCTCAGCGAGGCCCTTAACCAGCCATTTGCCCTGTCACTGAATCTGGCGA GTGCCTTGCCGGATGTCGATTTTGGCGCCGTGCTCGACCAGCCGTGTGAGCTGCTGGTGTGGTACGAAGGCGAACTGAAA CGGCGCGTCAGCGGGATTATCAGCGCCTTCGCACAGGGCGACACCGGCTTTCGCCGCACACGCTATCAGGCAGAGGTTCG CCCGGCACTGTGGCGGCTGGGGCTGCGTACCAATGCCCGCCTCTTTCAGGCGCAAAAGCCGGAGGCCATTATCGGTACGT TGCTGGAAGAGTCTGGCATTACCGATTATGCCTTTGCATTACGTCACGACCACGCCCCGCGCGAATACTGCGTACAGTAT CGTGAGAGTGATTTGGCGTTTGTCACCCGTCTGGCAGCGGAAGAAGGGCTGTACTTCTTCCATGAGTTTGAAGAAGGCAA GCATCGCGTCGTCTTTGCGGATGATGCCGGGGCGCTCAGCAAAGGCCCCGAACTGTTCTTCAACCTCGCCAATCAGGGAC TGAGCGAAGGCGACTATGTCCGCCGCTTCCGCTACGCCGAAGCCGTGAGTACCGCCGAGGTCGCCCTCAAGGATTACAGC TTCAAAACCCCGGCCTATGGCCTGCTGCACAGCAAGATGAGTGGCGAACTGTCACACCAGCGCGAAAGCTATCAGCACTT CGGCTACCCCGGCCGCTTCAAGCAAGACCCGAGCGGCAAGGCCTTTACCGGCTACCGGCTGGATGCGTTACGCGCGAATG CGATGACCGGCTCGGGTGAATCCAATGCCGCCATGCTGATGCCCGGCAACAGTTTTACCTTAACCGAACATCCTAATCCG ACGCTGAATAGTGGCTGGCAACTGGTTGCCATCACGCACAGCGGGCAGCAACCGCAGGCACTGGAAGAAGAAAGTGGCGG TGAACCGACCACCTACAGCAACAGCTTCGAGGTCATCAGCGCCAAAAGCACCTGGCGTGCCGACCTGCCGTACAAGCCGA TGGTGGATGGTCCGCAGATTGCCACCGTGGTGGGCCCCGCTGGTGAGGAAATCTACTGTGACGAATATGGCCGCATCAAA TTGCAATTCCCGTGGGACAGATACGGCTCCAGTGACGACCAGAGTTCCTGCTGGGTGCGCGTCAGTCAGGGCTGGGCGGG CGGCCAATATGGCCTGATAGCCATCCCACGCATCGGCCATGAGGTCATTGTCAGTTTCCTTGAAGGCGACCCGGACCAGC CGATTGTCACCGGACGCACCTTTCATGCCACTAACCCGTCGCCGTACCCGCTACCGGCGAACAAGACCCGCACCTCGCTG CGTACCTCGACGCATAAAGGGGCCGGGTTCAACGAACTGCGCTTTGAAGACCAGGCCGGGCAGGAAGAGGTATTTATCCA TGCCCAGAAGGACATGAACACCGTGGTGTTGAATAACCGTAGTACGACTGTGACCGCTGACCACACCGAAAGCGTCGGTG GCAATCAGGCAGTCTCGGTAGTGAAAGACCAGTCTACTGAAATCCAGGGGCAGCAGAGTATCGCCGTGACCAAAAACCGT AACACGGTCGTGGATGACAACGACAGCCTGCAGGTGAAAAACAACATCGCTATCCAGTCGCAGAAGGGGGACATCCTGAT AGCGACTGACAAGGGGTTTATTGGTATCGGTGCTGACGGGGTTATCAATATCAAGGGTACCCACATTGTCATCAACGGCC AGCAAATCGACCTGAACTGA Protein sequence : MFITGREGINVANSTGLQFTVKVGALPASTFAVVDFQLSEALNQPFALSLNLASALPDVDFGAVLDQPCELLVWYEGELK RRVSGIISAFAQGDTGFRRTRYQAEVRPALWRLGLRTNARLFQAQKPEAIIGTLLEESGITDYAFALRHDHAPREYCVQY RESDLAFVTRLAAEEGLYFFHEFEEGKHRVVFADDAGALSKGPELFFNLANQGLSEGDYVRRFRYAEAVSTAEVALKDYS FKTPAYGLLHSKMSGELSHQRESYQHFGYPGRFKQDPSGKAFTGYRLDALRANAMTGSGESNAAMLMPGNSFTLTEHPNP TLNSGWQLVAITHSGQQPQALEEESGGEPTTYSNSFEVISAKSTWRADLPYKPMVDGPQIATVVGPAGEEIYCDEYGRIK LQFPWDRYGSSDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSL RTSTHKGAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTTVTADHTESVGGNQAVSVVKDQSTEIQGQQSIAVTKNR NTVVDDNDSLQVKNNIAIQSQKGDILIATDKGFIGIGADGVINIKGTHIVINGQQIDLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 2e-162 | 53 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 2e-130 | 44 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 3e-130 | 44 |
