Gene Information

Name : ECA2862 (ECA2862)
Accession : YP_050953.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3202360 - 3202950 bp
Length : 591 bp
Strand : +
Note : Similar to Shigella flexneri 2a hypothetical 23.4 kDa protein SWALL:Q93F37 (EMBL:AF326777) (197 aa) fasta scores: E(): 2.1e-24, 38.58% id in 184 aa, and to Escherichia coli O6 conserved hypothetical protein c1171 SWALL:AAN79639 (EMBL:AE016758) (197 aa) fa

DNA sequence : 
ATGGGATACAATCAAATCATTACCGATACCAACGTCAGATACGTTCACCATCGGAGACTACGTAGAAATCTACGAAACCA
CTTCAATCGACTCTTTGACCGTTATTCAAAATTACTTATGTTACGAGTCGACTTCTCATATCTTAAAAAGAGTGACTCCC
ATCATTACGCAGATACTCACTCTACCGTTTGTGATATCACGCTGTTATTACAGCAGTGTGATTTTTTAAAGGGACTCGTC
GGCTATGCCTGGGTACTGGAATATACCGAAGAGCATAGTTTTCATATCCATGCCGCGTTTTATCTCAATGGTCAGAAGCA
TCGTAAAGTTTGGAGCATATTTGAAGACATTAGGGATATTTGGGCGAATGTGACAGAGGGGGATGGTTATGCACACCGAT
GTGAACCCAAAGAACATTACAGGGTAAAAGGGGAATGGGTGACATCCTATGACGACGACGAAGGGAGAGACAGAATGCTA
TATATCTTGAGTTACCTCAGTAAACAGGACCAGAAAAAAGAACGGGTTATTTATCATGTCAGTGAAATACCCAAGCCTGC
TCGTAGAGGCCGACCAAGGTGTTTGGGTTAA

Protein sequence : 
MGYNQIITDTNVRYVHHRRLRRNLRNHFNRLFDRYSKLLMLRVDFSYLKKSDSHHYADTHSTVCDITLLLQQCDFLKGLV
GYAWVLEYTEEHSFHIHAAFYLNGQKHRKVWSIFEDIRDIWANVTEGDGYAHRCEPKEHYRVKGEWVTSYDDDEGRDRML
YILSYLSKQDQKKERVIYHVSEIPKPARRGRPRCLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1128 NP_286663.1 hypothetical protein Not tested TAI Protein 1e-26 43
Z1567 NP_287071.1 hypothetical protein Not tested TAI Protein 1e-26 43
unnamed CAE85184.1 hypothetical protein Not tested PAI V 536 Protein 5e-22 43
S3187 NP_838470.1 hypothetical protein Not tested SHI-1 Protein 6e-23 43
SF2982 NP_708756.1 hypothetical protein Not tested SHI-1 Protein 6e-23 43
unnamed AAL08430.1 unknown Not tested SRL Protein 1e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECA2862 YP_050953.1 hypothetical protein VFG0646 Protein 2e-23 43
ECA2862 YP_050953.1 hypothetical protein VFG1021 Protein 4e-26 42