|
Name : ECA2860 (ECA2860) Accession : YP_050951.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG3596 EC number : - Position : 3199575 - 3200462 bp Length : 888 bp Strand : - Note : Similar to Shigella flexneri 2a hypothetical 32.4 kDa protein SWALL:Q93F04 (EMBL:AF326777) (290 aa) fasta scores: E(): 3.4e-37, 43.43% id in 297 aa, and to Escherichia coli hypothetical 32.5 kDa protein SWALL:Q8RLA4 (EMBL:AY082443) (290 aa) fasta scores: DNA sequence : ATGAAAAAATCGTCAGGTTATTCCCTGATCCGCCGCCATCTGCGGCGCTATCCCCGTTCGTTACGTCATGCCCTTATGCA GGAGCTGACCCGGCTGGTCACCTATGAACCGGTGATTGGCATTATGGGCAAAACTGGCGTAGGGAAATCGAGCTTATGTA ATGCGCTGTTTCGCAGCGAAGTCTGCGCAGTGAATGCTGTCGCAGCCTGTACCCGTGAGCCACAACGCATTCGCCTGCGT TTTGGGCGTCATTATCTCACGCTGGTTGATTTACCCGGGGTGGGTGAAAGTCAGCAGCGGGATGAGGAATATCGCGCACT GTACCAATCCCTGTTGCCGGAGCTGGATATGGTGCTGTGGGTATTGAAGGCGGATGACCGCGCCTATTCTGCCGAGGAAC AGTTTTATCGGGATGTGTTCGGCTCCGTGAACGGTGAGCATACGCCGATACTCTGGCTGCTCAATCAGGTCGACAAGATT GAACCGAGTGAAGAATGGCACTGGGCCTCTGCGCAGCCGTCATCCAGGCAACGGGAACATATGGCACAAAAGCGGGTGGC TATCGGGCAACAACTCGGTATCGTGGCAGAGAACATTTTACCGCTTTCCGTTAAAGGCCGTTATCAACTGGGAAAAATGG TGGAGGCGATGATAACCCTTCTCCCAAAGCAGGCTCGCAGTCCGGTCATTCCTCATTTACGTGCTGAGCACCAAACCGAA AGCGCGATACAGCAGGCCAGGGCTGGATTTTCCGACACGGTAGTCAGTGCGGTGGATTGGGTTATTGACCACGCGCCGTT GCCTCAGGTAGCAAAACAGGTGCTGCATGGCGTCACCCATTCCGTTGCCAGAGTGGCAAATGCCGTGTGGTCTTTCTTCT TCGACTAA Protein sequence : MKKSSGYSLIRRHLRRYPRSLRHALMQELTRLVTYEPVIGIMGKTGVGKSSLCNALFRSEVCAVNAVAACTREPQRIRLR FGRHYLTLVDLPGVGESQQRDEEYRALYQSLLPELDMVLWVLKADDRAYSAEEQFYRDVFGSVNGEHTPILWLLNQVDKI EPSEEWHWASAQPSSRQREHMAQKRVAIGQQLGIVAENILPLSVKGRYQLGKMVEAMITLLPKQARSPVIPHLRAEHQTE SAIQQARAGFSDTVVSAVDWVIDHAPLPQVAKQVLHGVTHSVARVANAVWSFFFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66199.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 7e-47 | 44 |
| unnamed | AAL08471.1 | unknown | Not tested | SRL | Protein | 7e-47 | 44 |
| ECO103_3582 | YP_003223441.1 | hypothetical protein | Not tested | LEE | Protein | 3e-46 | 44 |
| Z1210 | NP_286745.1 | histone | Not tested | TAI | Protein | 1e-45 | 44 |
| Z1650 | NP_287153.1 | hypothetical protein | Not tested | TAI | Protein | 1e-45 | 44 |
| unnamed | AAL99256.1 | unknown | Not tested | LEE | Protein | 8e-47 | 44 |
| APECO1_1093 | YP_853113.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 1e-45 | 44 |
| aec64 | AAW51747.1 | Aec64 | Not tested | AGI-3 | Protein | 1e-46 | 44 |
| yeeP | ADD91709.1 | YeeP | Not tested | PAI-I AL862 | Protein | 1e-46 | 44 |
| yeeP | CAE85196.1 | YeeP protein | Not tested | PAI V 536 | Protein | 2e-46 | 44 |
| sap | NP_838477.1 | hypothetical protein | Not tested | SHI-1 | Protein | 3e-46 | 43 |
| unnamed | AAK00473.1 | unknown | Not tested | SHI-1 | Protein | 8e-46 | 43 |
| sap | NP_708764.1 | hypothetical protein | Not tested | SHI-1 | Protein | 1e-45 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECA2860 | YP_050951.1 | hypothetical protein | VFG1062 | Protein | 4e-47 | 44 |
| ECA2860 | YP_050951.1 | hypothetical protein | VFG1674 | Protein | 4e-47 | 44 |
| ECA2860 | YP_050951.1 | hypothetical protein | VFG0654 | Protein | 5e-46 | 43 |
