Gene Information

Name : ECA2854 (ECA2854)
Accession : YP_050945.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3196875 - 3197252 bp
Length : 378 bp
Strand : -
Note : Similar to Shigella flexneri 2a hypothetical 13.8 kDa protein SWALL:Q9AL43 (EMBL:AF200692) (126 aa) fasta scores: E(): 8.4e-25, 64.76% id in 105 aa, and to Escherichia coli hypothetical protein yeeU SWALL:CAD42100 (EMBL:AJ494981) (122 aa) fasta scores: E(

DNA sequence :
GTGATGATCACATTACTACCGCACTTTTATAAGGAAACCATCATGCCATCATCGGATACCCCTGAATGGGGACTAAAATG
TGCCATCACTCCGCGATTCGGAGCCAGGCTGGTTCAGGAAGGCAACCGTCTGCACTATCTGGCAGACCGGGCCAGCGTTG
TCGGTACGTTCAGTAAAACAGAAGCCCGTCATCTGGAACACGTCTTCCCTGAGCTGATTAAGCAGTTGGAGCATAAACTA
CGCGCGAGTGAACTGAATCCCCGTCAGCAGAAGTGCGTCACGTTGCATTGCAACGAATGGACCTGTGAAGCCGATACGCT
GGGCAGTGTTGGCTACGTGTATATTGCTATTTATCCCTCTTCAGCGGCAACACAATAA

Protein sequence :
MMITLLPHFYKETIMPSSDTPEWGLKCAITPRFGARLVQEGNRLHYLADRASVVGTFSKTEARHLEHVFPELIKQLEHKL
RASELNPRQQKCVTLHCNEWTCEADTLGSVGYVYIAIYPSSAATQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-27 65
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-27 65
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 7e-28 65
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 9e-27 63
Z1220 NP_286755.1 structural protein Not tested TAI Protein 7e-27 63
Z1658 NP_287161.1 structural protein Not tested TAI Protein 7e-27 63
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 6e-27 62
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 4e-27 62
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 1e-27 62
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 2e-26 62
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 2e-27 61
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-26 61
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-28 55
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-28 55
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 2e-27 54
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-26 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECA2854 YP_050945.1 hypothetical protein VFG0662 Protein 3e-28 65
ECA2854 YP_050945.1 hypothetical protein VFG1681 Protein 5e-28 62
ECA2854 YP_050945.1 hypothetical protein VFG1619 Protein 6e-28 61
ECA2854 YP_050945.1 hypothetical protein VFG1068 Protein 1e-26 61