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Name : intA (ECA2750) Accession : YP_050841.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : prophage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 3092131 - 3093381 bp Length : 1251 bp Strand : + Note : Similar to Escherichia coli prophage cp4-57 integrase inta or slpa or intx or b2622 SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 1e-90, 58.56% id in 403 aa DNA sequence : ATGGCAATTCAGACAAAGCGCCTCACAAACACGGAAGTCAAAGCCGCTAAAGCAATAGACAAAGAATTGTCACTGCATGA TGGAGGCGGGCTGCTATTGTTCGTCAAACCTTCCGGCACAAAGACATGGCGTTTTCGCTATTACCAGCCACAAACTAAAA AACGCACTACGTTGACGTTTGGTAGCTATCCGGCAATTTCTTTGGCTGATGCCAGGCAAATGCGGGAAGCAGCCAAAGCA CTCTTAGAAAAAAGTATCGACCCACAATTCCACCAGCAACAGCAGCGCGAACAAGAACAAGCCATCAACCTAAATACATT CGCTAAAGTCTCCGCTGACTGGTACGAATTAAAAAAGTCTCAACCGCTGGCCGAGAACACCATTAAAGATATTTGGCGTT CGCTAGAAAAATACGTGTTCCCGTTCATCGGAACCTTACCGATAACCCAGCTTACCGCTCGTCACTTCATCAGCGCGCTG GAGCCGATACAGGCCAGTGGCAAACTGGAAACCGTCAAGCGGGTAAGTCAGCGAATTAACGAGGTGATGGATTATGCGGT TAACTCCGGGCTAATTCCTGCGAATCCCGCCGCCAAGATCCGCAAAGCGTTTCAGACGCCGGTGAAAACTCATATGCCGA CCATTCGGCCAGAGGCATTACCTGGCTTGATGAAAACGCTATCGGTCGCCAGCATTGAGTTACAGACCCGCTTATTGATT GAATGGCAGCTACTCACCGTTACCCGCCCTGCCGAAGCCGCTGAAACCCGTTGGAGCGAGATAAACCTTAAAGATAACAC CTGGACGATCCCCGCTGGCCGCATGAAGATGCGCCGTGATCACATTATTCCTCTGCCCCCGCAGGCATTAGCCATTCTGG ACGCCATGAAGCCCATCAGCGGACACAGGGAATACCTGTTTCCTTCCAGTAAAGATCCCAAGCAGCCGATGAACAGCCAG ACCGCTAATGCCGCATTGCGGCGTATGGGTTACAAAGGTGTACTGGTATCCCACGGCCTACGCGCCATATTCAGTACCGC CGCCAATGAAGAAGGGTTCCCGCCAGATGTGATCGAGGCCGCCCTCGCCCACGTAGACACTAACGAAGTGCGCCGTGCCT ATAACCGCTCCACCTATCTGGAACAACGCAAGGTGTTGATGTGCTGGTGGGGCGAATTTGTCGAAACAGCCGCAACGGGG AAAGTGATGGCGTCGGAAGGAGCCAGAGGCTTACGCGTCGCGAATGGCTAA Protein sequence : MAIQTKRLTNTEVKAAKAIDKELSLHDGGGLLLFVKPSGTKTWRFRYYQPQTKKRTTLTFGSYPAISLADARQMREAAKA LLEKSIDPQFHQQQQREQEQAINLNTFAKVSADWYELKKSQPLAENTIKDIWRSLEKYVFPFIGTLPITQLTARHFISAL EPIQASGKLETVKRVSQRINEVMDYAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPGLMKTLSVASIELQTRLLI EWQLLTVTRPAEAAETRWSEINLKDNTWTIPAGRMKMRRDHIIPLPPQALAILDAMKPISGHREYLFPSSKDPKQPMNSQ TANAALRRMGYKGVLVSHGLRAIFSTAANEEGFPPDVIEAALAHVDTNEVRRAYNRSTYLEQRKVLMCWWGEFVETAATG KVMASEGARGLRVANG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 9e-100 | 54 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 7e-106 | 52 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 7e-106 | 52 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 5e-106 | 52 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 5e-106 | 52 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 5e-106 | 52 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-94 | 49 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-94 | 49 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-94 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| intA | YP_050841.1 | prophage integrase | VFG1092 | Protein | 8e-95 | 49 |
