Gene Information

Name : ECA2739 (ECA2739)
Accession : YP_050830.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 3080104 - 3081720 bp
Length : 1617 bp
Strand : +
Note : Similar to Yersinia pestis ABC transporter ATP-binding subunit ypo1270 SWALL:Q8ZGL9 (EMBL:AJ414147) (530 aa) fasta scores: E(): 1.2e-144, 74.85% id in 529 aa, and to Salmonella typhi ABC-transporter ATP-binding protein sty2455 SWALL:Q8Z583 (EMBL:AL627273)

DNA sequence :
ATGTCCAGTTCACCTTTATTGCAGATAGATGATCTCAGCATTGCCTTCCGCAAAGGCGATCAGGAGCAGCGTGTTGTCGA
CCAGCTTTCACTGGCGGTGAATGCGGGTGAGACGCTGGCGCTGGTCGGCGAGTCAGGTTCGGGGAAAAGCGTCACTGCAC
TGTCGGTTTTACGCTTGCTCCCTTCCCCACCCGTGGTTTATCCGCAGGGAGATATCCGCTTTGCGGGGCAATCGCTGCTA
CATGCCGATGAAAAAACACTGCGTCAGATACGCGGTAACCGAATTGCGATGATCTTTCAGGAACCGATGGTGTCGCTTAA
CCCCCTGCAAAGCATTGAGAAACAGCTAATTGAAGTGCTTTCGCTCCATTGTGGCATGCGCACCGAGGCGGCCCGTAGCG
AAGTCATCTCCTGTCTGGATCGCGTGGGTATTCGGCAGGCTAAAAGCCGATTGAATGATTTCCCACACCAGCTTTCCGGC
GGGGAACGCCAGCGCGTCATGATTGCAATGGCGCTGCTGACTCAGCCCGATTTACTCATTGCTGATGAGCCGACAACAGC
ACTGGACGTTACCGTTCAGGCGCAAATACTGAAATTGCTGAACGAGCTGAAGCGGGAAATGGGGATGAGCTTACTGTTCA
TCACCCACGATCTGAATATCGTCCGTCAATTGGCGGATAACGTGTCGGTTATGAAATCGGGTAAAGCCGTGGAGCACAAC
AGCTGTCAGCAGCTTTTCAGCGCTCCGCAGCATCCTTACACACGCCAATTACTGGACGCAGAGCCATCAGGCGAGCCGCT
TCCGGTAGAGGATGACGGTGGCCCCCTCCTGCGGGTGGAGCATTTGCACGTTTCATTCCCTATCAAACGCGGCCTTTTGC
GCCGTACCGTTGACGAAAAGCAGGTCGTTAATAATATTAGTTTCACCTTACGGCGCGGTGAAAGCCTGGGTTTGGTAGGG
GAATCGGGTTCAGGGAAAAGCACTACCGGATTAGCGCTACTTCGCCTGATTCAATCACGCGGTGATATCTGGTTTGATGG
TCAACCCTTGCAAGGGCTAACCCGTAAGCAAATGCTGCCCTTCCGTCACCGGATTCAGGTCGTTTTTCAGGACCCGAACT
CCGCGCTGAACCCACGGCTGAATGTGGAGCAAATCATTGCTGAGGGATTGATCGTTCATCACAAATTGAGTAAAGAGGCG
CAAGAACAACGCGTGGTGGCGGTGATGCAGGAAGTCGGGCTGGATCCCACCACTCGTTACCGTTATCCCTCCGAGTTTTC
CGGCGGTCAGCGCCAGCGTATCGCTATCGCTCGGGCACTAATACTGCAACCGGAACTGCTGATTCTCGATGAACCTACGT
CGTCGCTGGACAGAACGGTTCAGGCGCAAATTCTGGCCCTGCTGAAGTCATTACAGGAAAAGCACAAAATCGCCTACCTG
TTCATCAGCCATGATTTACAAGTTATCCGCTCACTGTGTCATCAGGTTATCGTGTTACGACAGGGTGAAGTCGTCGAACA
GGGGGAGTGTAAACAGGTATTCACGCATCCTGCCGAGCATTACACGCGGGAGCTGCTACAGTTTTCATCTGGCATGACGG
AAACGCAATCGGCATAA

Protein sequence :
MSSSPLLQIDDLSIAFRKGDQEQRVVDQLSLAVNAGETLALVGESGSGKSVTALSVLRLLPSPPVVYPQGDIRFAGQSLL
HADEKTLRQIRGNRIAMIFQEPMVSLNPLQSIEKQLIEVLSLHCGMRTEAARSEVISCLDRVGIRQAKSRLNDFPHQLSG
GERQRVMIAMALLTQPDLLIADEPTTALDVTVQAQILKLLNELKREMGMSLLFITHDLNIVRQLADNVSVMKSGKAVEHN
SCQQLFSAPQHPYTRQLLDAEPSGEPLPVEDDGGPLLRVEHLHVSFPIKRGLLRRTVDEKQVVNNISFTLRRGESLGLVG
ESGSGKSTTGLALLRLIQSRGDIWFDGQPLQGLTRKQMLPFRHRIQVVFQDPNSALNPRLNVEQIIAEGLIVHHKLSKEA
QEQRVVAVMQEVGLDPTTRYRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILALLKSLQEKHKIAYL
FISHDLQVIRSLCHQVIVLRQGEVVEQGECKQVFTHPAEHYTRELLQFSSGMTETQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-76 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-76 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-88 41