Gene Information

Name : ECA2722 (ECA2722)
Accession : YP_050813.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : exogenous ferric siderophore TonB-dependent receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 3059363 - 3061480 bp
Length : 2118 bp
Strand : -
Note : Similar to Vibrio cholerae iron-regulated outer membrane virulence protein precursor IrgA or vc0475 SWALL:IRGA_VIBCH (SWALL:P27772) (652 aa) fasta scores: E(): 9.1e-29, 35.05% id in 716 aa, and to Escherichia coli exogenous ferric siderophore receptor R4

DNA sequence :
ATGGCAATAAATATAAGAAAATCGGTGGCATTGGCGCTGGTTACAATGGCAACGACACCCGTTATCGCCGCACAGGACGA
TACGATGGTCGTGACGGCTTCGGGTTATGAACAAAAAATCACCGAAGCGGCCGCGAGTATTTCGGTTGTTGGTCATGATG
AACTGACTAAACGTAAATATAACGATCTTGGTGAAGCACTCAGTGACGTAGAAGGGGTTGATGTACGAAGCTCAACGGGT
AAAACAGGTGGCCTAGACATCAGCATTCGCGGTATGCCAAGTGACTATACGCTGATTCTGGTTGATGGTATTCGCCAGAA
CGGCTCATCAGATGTCACGCCGAATGGGTTTGGTACAATGAACACCGGCTTTATTCCACCGTTGGCGGCGATAGAGCGTA
TTGAAGTTATCCGCGGGCCGATGTCAACGCTATATGGTTCTGATGCTATGGGTGGCGTGGTAAATATCATCACCAAAAAA
GCGTCGAAAGAGTGGGTCGGAAATATCACTCTGGATCATACTTTTCAGGAGGACAGAGACTATGGTGACGCGTCCAAGTT
CTCGATTTATTCCAGCGGTGCGTTGATCGAAGACAAACTGGGGCTCGCCCTACGCGGCAACATCTTCCGCCGCGATGCAT
CAGAAGTGAGTTCGTCCTCAACCGGACAGGAGCTCAGTATGCGTGGTCCGAATCCAGTTAAGTCTGACAATTACCTTTTG
GGTGGTAAGTTATCCTGGCTGCTGGATAGTCGTAATACCCTGTGGCTGGATGGTGAAGTCTCCAACCAGAAATATGATAA
CAAGGAAGAACAACTCGGTGCGCTGGGAGCTGGTACTGCGGCTCGGGGCGGCGGTTATGAAGATACACTGCGTTATGAGC
GTCGCAAGATTACGCTGGGTAGCGATAATCAGCTCGATTTTGGTACATGGAATTCGAGCTTGTCCTTCAACCAGACAGAG
AACAAGGGGCGGTTGATTCCTCGTTCTACGGTGCCGGCAGGGTCAACAGCCTCAGGGCAAAAGCGCGAGCTAAAAAATAC
CAACTACATTCTTGATACGAAACTGGTTAGCCCACTGGGTGACAGTCATTTAGTGACGTTGGGGGGGCAGTACTGGAATG
CCGTCATGAAAGATGGAATTGTTCTGGCGAATACGGGTGAGAAATTCGAACAGAATTCGTGGTCGCTCTTTGCTGAAGAT
GAATGGCGCATTGTTGATTCGCTAGCATTAACCACAGGCGCTCGTTATGAACATCATGAAGCGTTCGGTGGCCATGTTAG
CCCGCGTGCTTATCTCGTGTGGAATGCGTTGGATGAATTAACGATTAAAGGTGGGGTGAGCACAGGCTACAAGACGCCAT
CGTTGGCTCGGTTACATAACGGCATAAGTGGCGTAACGGGGCAGGGTACGATCAATACGATTGGGAACCCTAACCTGAAG
CCGGAAGAAAGCGTGAATACGGAGCTGGGGGCGTACTATGAGCACTTTAGTGGTTTCTCTACTAACGCTACGCTTTTCCA
TAACCGCTTCCGTAATAAGATCGATAGTTACGAAATTGATACGGTAACGTCTAGCTATCGCAATATCGGTAAAGCGAACA
CGCAAGGTCTGGAGTTGGGATCGACTATCCCTCTATGGTCAGACAACTGGACGCTGAACGTGAATTACACCTTTACTGAC
AGCGAGCAGAAAGGCGGAGAAAATCCCGGTGCCCGTTTGACCAATACGCCTAAGCACATGGCCAATGCGCGTTTAAACTG
GAGTGTGAACGAGCAGTTGAGTACCTGGCTTAAAGCGGAATATCGAGGTAAAACGGCTCGTTTCACGGAAAATTATGACC
AACTCAGTGATGCAAACAAGGTTGTTCATGACAATCTTGGCTCGGATTTCAAATCATTCACCGTCGTGAACCTCGGCGGA
TCGTATAAGATATCCAAAGATGTAACATTGAACGGATCGGTTAATAACCTGTTGGACAAAGATTTCACCAAGACTTATGT
CCTCCCGGTCGGAACGGGTACGACAACAGCGGGTGATTACTTTACATCAAGTCAGGTCACTACGGGTTCCGTAGTACCAG
GTCGTAATTACTGGGTATCGGTAAACGTCAACTTCTGA

Protein sequence :
MAINIRKSVALALVTMATTPVIAAQDDTMVVTASGYEQKITEAAASISVVGHDELTKRKYNDLGEALSDVEGVDVRSSTG
KTGGLDISIRGMPSDYTLILVDGIRQNGSSDVTPNGFGTMNTGFIPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITKK
ASKEWVGNITLDHTFQEDRDYGDASKFSIYSSGALIEDKLGLALRGNIFRRDASEVSSSSTGQELSMRGPNPVKSDNYLL
GGKLSWLLDSRNTLWLDGEVSNQKYDNKEEQLGALGAGTAARGGGYEDTLRYERRKITLGSDNQLDFGTWNSSLSFNQTE
NKGRLIPRSTVPAGSTASGQKRELKNTNYILDTKLVSPLGDSHLVTLGGQYWNAVMKDGIVLANTGEKFEQNSWSLFAED
EWRIVDSLALTTGARYEHHEAFGGHVSPRAYLVWNALDELTIKGGVSTGYKTPSLARLHNGISGVTGQGTINTIGNPNLK
PEESVNTELGAYYEHFSGFSTNATLFHNRFRNKIDSYEIDTVTSSYRNIGKANTQGLELGSTIPLWSDNWTLNVNYTFTD
SEQKGGENPGARLTNTPKHMANARLNWSVNEQLSTWLKAEYRGKTARFTENYDQLSDANKVVHDNLGSDFKSFTVVNLGG
SYKISKDVTLNGSVNNLLDKDFTKTYVLPVGTGTTTAGDYFTSSQVTTGSVVPGRNYWVSVNVNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 5e-176 56
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 7e-178 56
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 7e-178 56
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 7e-178 55
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 7e-178 55
iha AAF36432.2 adhesin Virulence TAI Protein 5e-178 55
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 2e-177 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECA2722 YP_050813.1 exogenous ferric siderophore TonB-dependent receptor VFG1731 Protein 3e-178 56