|
Name : ECA2624 (ECA2624) Accession : YP_050716.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : phage capsid portal protein Q Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 2956004 - 2957050 bp Length : 1047 bp Strand : + Note : Similar to Bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 3.8e-60, 44.89% id in 343 aa and Bacteriophage 186 capsid portal protein W SWALL:Q37851 (EMBL:U32222) (340 aa) fasta scores: E(): 1e-61, DNA sequence : TTGAGCAAACGCAAGCCATATCGTACACAGCGGCAAAGCGGAACAGATCTGGCCGCAGAATTACAAAAACTCCCCGGCCT GAGTACGTTTACATTCGACGGCCCCTGGCCTGTGAGCGGCGCACATGATCTGTTAGATAACATGTATTGCGCCAACAATG GCCGGTATTACGATACACCGATCAGTTGGTACGGGTTGGCTCGCCAGTTCGGTTACGCAAGCTGGCATCAGTCGGCTCTG TTCTTCAAGCGTAATGTGCTAGCTGGCTGCTTTATTCCTCACAAGCTGTTATCTCGTCAGGCGTTCTCTGCATTCGCACT GGACTGGTTTGTGTTTGGCAACGCATATCTTGAGATGCGCAAAAACTGGATTAACGGGCCGCTGGGGTTTCGTAACTCAC TGGCTAAATACACCCGGCGTGGTTCCGATCTCGATACCTACTGGTTTATTCAGTCTGGACTTGATGATCACCAGTTTGAA ACAGGCTCTGTCTGCCACGTCATCAACCCTGATATTCATCAGGAAATCTACGGTATGCCGGAATACTTTGCCGGGCTGCT GTCTGCCAACCTGTCACACTCTGCTGATAAGTTCCGCAAACTCTATTACGACAACGGCTCTCATGCTGGCTGCATTGTTT ACGTGAACAGCGCGATTGCAGACCAAGAAAGCCTCGACACACTGAAGAAGACACTGACCGACACACGGCGGGGAGGAGCA TTTAAAAACATCCTGCTGCATGCGCCAAACGGCGGCAAAGACTCAGTGCAGATACTGCCATTCAGCCAGATATCAGCAAA GGATGAATTCATTGGCGTTAAATCATCCACACGCGATGATATTCTGGCAGCTCACCGCGTCCCACCACAACTGATGGGCG CCATACCTGAAGGTAACGGCTCGTTTGGAGACGTTGAGAAAGCGGCCCGCGTATTCGCTATCAACGAACTGACACCCGTA ATGGAATCAATGAAGCACGTCAATGATTGGCTAGGTGAAGAAGTAATCCGCTTCAACCCTTACGCCTTGCTTGAGCCAGA GAAGTAA Protein sequence : MSKRKPYRTQRQSGTDLAAELQKLPGLSTFTFDGPWPVSGAHDLLDNMYCANNGRYYDTPISWYGLARQFGYASWHQSAL FFKRNVLAGCFIPHKLLSRQAFSAFALDWFVFGNAYLEMRKNWINGPLGFRNSLAKYTRRGSDLDTYWFIQSGLDDHQFE TGSVCHVINPDIHQEIYGMPEYFAGLLSANLSHSADKFRKLYYDNGSHAGCIVYVNSAIADQESLDTLKKTLTDTRRGGA FKNILLHAPNGGKDSVQILPFSQISAKDEFIGVKSSTRDDILAAHRVPPQLMGAIPEGNGSFGDVEKAARVFAINELTPV MESMKHVNDWLGEEVIRFNPYALLEPEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 4e-79 | 50 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 4e-79 | 50 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 2e-66 | 45 |
