|
Name : ECA2601 (ECA2601) Accession : YP_050692.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : major tail sheath protein FI Function : - COG functional category : R : General function prediction only COG ID : COG3497 EC number : - Position : 2937468 - 2938652 bp Length : 1185 bp Strand : + Note : Similar to Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 3.9e-74, 50% id in 392 aa, and to Escherichia coli O157:H7 tail sheath protein of prophage cp-933t z2991 or ecs2645 SWALL:Q8XBE2 (EMBL:AE00 DNA sequence : ATGACCGACAACTTTTTCCACGGCGTCCGCGTCCGGGAAAGCACCGATCTGGTAACAGCCATCAATGACATTGACTCAAC AGTCATCGGCATTGTTGCTATTGCTGATGATGCAGATCCTGAGATGTTTCCGCTGAATACTCCCGTACTACTCACGCGCG TTAATAATGCGCTGGGTAAAGCAGGAAAAACCGGATCGCTTTACAAAAGCCTGAAAGCCATTTCTGACCAGTGCAGCACA AAAGTGATTGTGGTTCGCGTGGCGGCAGCAACGGATGGCGACGACAATCAAACGCAATCACAGCTTGTGATCGGCGGTAC TGCGGCAGATGGCAGCTATACCGGTATGTATGCGTTTTTGACCGCAGAACAGAAAACCGGTTACCGCCCGCGCATTCTGG CCGTTCCCGACCACGATACGATCGAGGTCGCCACCCAGCTTGGTGTTATCGCACAGAAACTGCGGGCGTTCTTTTATGCG TACTGCCACAACTGCGAAACCATTGCTGAGGCGAAAGCCTACCGCGAGACGCTGAACTACCGCGAGGTCATGCCTATCTG GCCTAACTTCATTGCGTATAACACGCTGACCGGTGAAAACGAGGAATTCCCGGCTGTAGCGTATGCCTGCGGCCTGCGTG CGTTAATTGATAATACGCAAGGCTGGCATAAGTCGCTGTCAAACGTAGCGGTCAATAACGTGCTTGGGATTTCTAAAGAC GTGTTCTGGGCATTACAAGCTGAAGACAGCGACGCTAACGAACTGAACGCGCACGAAATCACGACACTGATTAAGCGCGA TGGGTTCCGTTTCTGGGGCAACCGCACGACCGATCCCGACAAAGAATACATCTTTGAGGTGTACACCCGCACGGCTCAGA TTCTGGCTGACAGCATCGCGGAGGCACAATTCACCACAGTCGATAAGCCAATGACGCCTGGCAACGTAAAAGACGTTGTA AGCGGAATTAACGCCAAGCTACAGGCGTTAGTCACTGCGGGGAAACTGATCGGCGCGGCGTGCTGGTTCGATATCGTAGA CAACCCGACTACAGGGCTACGTCAGGGCAAGTGCATTGTGCGCTACAACTATACGCCCGTTCCTCCGCTGGAAGATCTCA GCCTGTATCAGACGTTTACCGACCAGTATTTCGAAACCGCTTTTTCTTCATTGGGGGGCGCGTAA Protein sequence : MTDNFFHGVRVRESTDLVTAINDIDSTVIGIVAIADDADPEMFPLNTPVLLTRVNNALGKAGKTGSLYKSLKAISDQCST KVIVVRVAAATDGDDNQTQSQLVIGGTAADGSYTGMYAFLTAEQKTGYRPRILAVPDHDTIEVATQLGVIAQKLRAFFYA YCHNCETIAEAKAYRETLNYREVMPIWPNFIAYNTLTGENEEFPAVAYACGLRALIDNTQGWHKSLSNVAVNNVLGISKD VFWALQAEDSDANELNAHEITTLIKRDGFRFWGNRTTDPDKEYIFEVYTRTAQILADSIAEAQFTTVDKPMTPGNVKDVV SGINAKLQALVTAGKLIGAACWFDIVDNPTTGLRQGKCIVRYNYTPVPPLEDLSLYQTFTDQYFETAFSSLGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13484.1 | putative tail sheath protein | Not tested | PAGI-6 | Protein | 1e-86 | 52 |
| t4301 | NP_807898.1 | major tail sheath protein | Not tested | SPI-7 | Protein | 2e-86 | 48 |
| STY4607 | NP_458690.1 | probable major tail sheath protein | Not tested | SPI-7 | Protein | 2e-86 | 48 |
