Gene Information

Name : yfeA (ECA2392)
Accession : YP_050487.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : periplasmic chelated iron-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2704043 - 2704957 bp
Length : 915 bp
Strand : +
Note : Similar to Yersinia pestis periplasmic chelated iron-binding protein YfeA precursor yfea or ypo2439 or y1897 SWALL:YFEA_YERPE (SWALL:Q56952) (311 aa) fasta scores: E(): 1.6e-89, 78.85% id in 298 aa

DNA sequence :
ATGATTGGCTTTCACATCCCTTTGCCTGCCCTATTTCGCCGTGTCGCGCTGCCGTGCGCATTGCTGCTTTTAGCCAACAC
ATCCGCTCAGGCGGCTGAAAAGCTTAAAGTCATCACCACCTTTACCATCATTCAGGATATCGCACAGAATATTGCAGGTG
ATGCAGCAACCGTTGAATCCATCACCAAACCTGGGGCAGAGATTCACGATTATCAACCGACACCACGTGATATCGTGAAG
ACACAGTCTGCACAGCTGGTGCTGTGGAACGGTATGAATCTCGAACGCTGGTTTACGCGCTTTTTCGAGAACGTGAAAAA
TGTACCCGCTGCTGTGGTAACGGAAGGCATCACACCGCTTCCTATTCGTGAAGGTGCCTATAATGGCAACCCGAACCCGC
ATGCCTGGATGTCTCCCTCCAATGCATTAATTTATATTGAAAATATTCGCAAAGGTCTGGTTCAAGCCGATCCTGCCAAT
GCAGAGACATACAACCGTAACGCGAAAGCCTATGCTGAAAAGATTAAGGCTCTCGACGCACCGTTGCGTGAACGTCTCGC
CCGCATCCCAGAACAGCAGCGTTGGTTAGTCACCAGTGAAGGCGCATTTAGCTATCTGGCGAAGGATTATCAGTTCAATG
AAGTTTACCTCTGGCCAATCAATGCCGATGAGCAAGGTTCGCCGCAGCAGGTGCGCCGAGTGATTGACACCGTGCGTGAA
AAGGCTATCCCTGTGGTATTCAGCGAGAGCACTATTTCCGATAAACCAGCGAAACAGGTCAGCAAAGAAACGGGGGCGAA
ATATGGCGGCGTGCTGTATGTTGATTCGCTGTCTACAGAAAAAGGCCCGGTGCCGACCTATATCGACCTGTTACAAGTGA
CGGTGGAAACCATCGCTAAAGGATTTAATCAATGA

Protein sequence :
MIGFHIPLPALFRRVALPCALLLLANTSAQAAEKLKVITTFTIIQDIAQNIAGDAATVESITKPGAEIHDYQPTPRDIVK
TQSAQLVLWNGMNLERWFTRFFENVKNVPAAVVTEGITPLPIREGAYNGNPNPHAWMSPSNALIYIENIRKGLVQADPAN
AETYNRNAKAYAEKIKALDAPLRERLARIPEQQRWLVTSEGAFSYLAKDYQFNEVYLWPINADEQGSPQQVRRVIDTVRE
KAIPVVFSESTISDKPAKQVSKETGAKYGGVLYVDSLSTEKGPVPTYIDLLQVTVETIAKGFNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-91 62
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-91 62
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-91 62
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-91 62
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-91 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_050487.1 periplasmic chelated iron-binding protein BAC0439 Protein 5e-114 79
yfeA YP_050487.1 periplasmic chelated iron-binding protein BAC0349 Protein 1e-91 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_050487.1 periplasmic chelated iron-binding protein VFG0525 Protein 1e-91 62