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Name : topB (ECA2337) Accession : YP_050432.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2646652 - 2648577 bp Length : 1926 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGACTTTTTATTGCCGAAAAGCCTAGCCTTGCGCGGGCGATTGCAGACGTGTTACCCAAACCGCATCGACGCGGCGA TGGTTTTATTGCCTGTGGCCAGAATGATGTTGTGACGTGGTGCGTGGGGCACCTGCTGGAGCAGGCGCAACCGGATGTTT ATGATGCGCGCTACGCACGGTGGTCTCTCGCCGACTTACCGATCATTCCTCAGAAATGGCTGTTGCAACCGCGCCCCTCG GTCAGCAAGCAGTTGAGCGCCATAAAAAAACTCCTGAATGATGCCAGCGAAGTGATTCACGCGGGAGACCCCGATCGTGA AGGGCAACTGCTGGTTGATGAAGTACTGGACTATCTTTCCCTACCGGAAGAGAAGCGTCAGCAGGTACGTCGTTGTCTGA TCAACGATCTCAATCCACAGGCGGTAGAGCGCGCCGTTTCTCGCTTGCGTGAGAACAGAGAGTTCATTCCCTTGTGCGTT TCGGCATTGGCGCGTTCCCGTGCTGATTGGCTCTACGGCATTAACATGACCCGTGCCTATACGATATTGGGGCGTAATGC CGGTTATGATGGCGTGCTGTCGGTTGGCCGCGTACAAACGCCAGTGCTGGGGCTGGTGGTGCGGCGAGATGAAGAGATAG AAAACTTCGTTTCCAAAGATTACTTTGAAGTTAAAGCCCATATCGTGACCCCGGCCGATGAACGTTTTGTCGCTATCTGG CAGCCCAGCGAATCCTGCGAGCCTTATCAGGATGAAGAAGGGCGCCTGCTGCATCGTTCTCTGGCGGATCACGTCGTTAA ACGCATCGACGGTCAGCCCGCGTTCGTCACCAGCTATAATGATAAGCGGGAATCGGAAACCGCACCGCTACCTTATTCGC TCTCGACGCTTCAGATTGAGGCTGCGAAGCGTTTCGGGCTTAGCGCACAGCAGGTACTGGACGTGTGTCAGAAGCTGTAT GAAACCCATAAGCTGATTACGTACCCACGTTCTGACAGTCGCTATCTGCCAGAAGAACATTTTACCGGACGTCATGCCGT CTTGAATGCGATAGCCGTACACCAACCTGACCTCTTGCCACAGCCGGTTATGGATATCGATCGGCGCAACCGCTGCTGGG ACGATGGTAAGGTTGACGCTCACCACGCGATTATTCCTACTGCTCGCAGTGCCAGTGCCTCGCTGACTGAGAATGAACGC AAGGTGTATGGTTTAGTCGCGCGGCAGTACATCATGCAGTTCTGCCCGGACGCCGTGTTTCGCAAATGTGTTATTGAATT GGATATTGCGGGCGGTAAATTTATTGCCAAAGCACGATTCCTGGCCGAGGCCGGTTGGCGAACGTTGCTAGGCGGCAAAG AGCGAAACGAAGAAAACGAAGGCATGCCGTTGCCCGTGGTGGCAAAGGGTGATGAATTACTGTGTGAACGCGGTGAGGTG GTTGAGCGTCAAACTCAGCCGCCGCGACCTTTTACCGATGCGACGCTGTTATCGGCGATGACGGGTATCGCACGTTTTGT GCAGGATAAAGAGTTAAAGAAAATCCTGCGGGCGACCGATGGTTTAGGCACAGAGGCGACGCGTGCAGGTATCATCGAGC TCTTGTTTAAGCGGACATTTCTTTTTAAAAAAGCGCGCTATATTCACGCGAGTGAAGCGGGGCGAGCATTAATTCACTCG CTGCCTGCTAGTGCGGCGCATCCTGATATGACCGCACATTGGGAAGCCACGTTGACGCAGATCAGCGAGAAGAAATGTCG CTATCAGGATTTTATGCAACCGCTGACGAACTCCTTACAGGAGCTGATTCAGCAAGCGAAACAAAACGGTGCAGTGAGAG CATTCAAAGGGTTTTCTGCACCGCCGTCGGGTGCCTCAAAGCGGCGCAAGCCTCAGGCTAAAAAAGCGAAGGAGCAGGAT CAATGA Protein sequence : MRLFIAEKPSLARAIADVLPKPHRRGDGFIACGQNDVVTWCVGHLLEQAQPDVYDARYARWSLADLPIIPQKWLLQPRPS VSKQLSAIKKLLNDASEVIHAGDPDREGQLLVDEVLDYLSLPEEKRQQVRRCLINDLNPQAVERAVSRLRENREFIPLCV SALARSRADWLYGINMTRAYTILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVSKDYFEVKAHIVTPADERFVAIW QPSESCEPYQDEEGRLLHRSLADHVVKRIDGQPAFVTSYNDKRESETAPLPYSLSTLQIEAAKRFGLSAQQVLDVCQKLY ETHKLITYPRSDSRYLPEEHFTGRHAVLNAIAVHQPDLLPQPVMDIDRRNRCWDDGKVDAHHAIIPTARSASASLTENER KVYGLVARQYIMQFCPDAVFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGGKERNEENEGMPLPVVAKGDELLCERGEV VERQTQPPRPFTDATLLSAMTGIARFVQDKELKKILRATDGLGTEATRAGIIELLFKRTFLFKKARYIHASEAGRALIHS LPASAAHPDMTAHWEATLTQISEKKCRYQDFMQPLTNSLQELIQQAKQNGAVRAFKGFSAPPSGASKRRKPQAKKAKEQD Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 4e-110 | 41 |
