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Name : hrpT (ECA2101) Accession : YP_050196.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : type III secretion system lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 2388490 - 2388681 bp Length : 192 bp Strand : + Note : Similar to Pectobacterium carotovorum subsp. carotovorum HrpT SWALL:Q93FZ0 (EMBL:AF302656) (63 aa) fasta scores: E(): 9.6e-22, 84.12% id in 63 aa, and to Erwinia chrysanthemi HrpT precursor SWALL:P94768 (EMBL:AF501263) (61 aa) fasta scores: E(): 6.3e-11, DNA sequence : ATGAACCATAAAACGTGGTTAGTGGTGTTCATCGCATTCTTATTGAGTGCCTGCAATTCACCGCGGCAGGTGACTAACTG TGCTTCAGTCACCTGTCGCCCGCAGCCAGAAACGCGACAGCTCATCATCTGGTGGCAGCCTGACCTGCGCAATGGCCCGG CGGATTACAGCAGGGTAAGCGTGGATGAGTGA Protein sequence : MNHKTWLVVFIAFLLSACNSPRQVTNCASVTCRPQPETRQLIIWWQPDLRNGPADYSRVSVDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpT | AAC35806.1 | putative outer membrane protein | Virulence | Hrp PAI | Protein | 1e-05 | 42 |
