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Name : hrpF (ECA2098) Accession : YP_050193.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : - COG ID : - EC number : - Position : 2385755 - 2385979 bp Length : 225 bp Strand : + Note : Similar to Pectobacterium carotovorum subsp. carotovorum HrpF SWALL:Q93FZ3 (EMBL:AF302656) (74 aa) fasta scores: E(): 3.6e-27, 97.29% id in 74 aa, and to Erwinia chrysanthemi HrpF SWALL:P94765 (EMBL:AF501263) (75 aa) fasta scores: E(): 6.1e-19, 72.6% id i DNA sequence : ATGTCCCTTAACCCCATTCAGCGCCGCCTTGACGCGCACCTGGTCGATTCGCAGCAGCAACTGGATGATATTGCTCTGAA TGTTGCCGAAGGCGGTGCCAGTCAGGCTGATAGCTACGCTTTTTTTGAAGCCAGTATGGATTATTCCAATGCCAACTGGG CGGTCGGGCAACTGTTGAGCGTTAAGCACGGTTTGGCAAAGGCCATCATCAATGACTTCAACTGA Protein sequence : MSLNPIQRRLDAHLVDSQQQLDDIALNVAEGGASQADSYAFFEASMDYSNANWAVGQLLSVKHGLAKAIINDFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | AAB49177.1 | HrpF | Virulence | Hrp PAI | Protein | 2e-14 | 61 |
| hrpF | ABA47305.1 | HrpF | Virulence | S-PAI | Protein | 8e-07 | 42 |
