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Name : hrcJ (ECA2095) Accession : YP_050190.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2383611 - 2384378 bp Length : 768 bp Strand : + Note : Similar to Pectobacterium carotovorum subsp. carotovorum HrcJ SWALL:Q93FZ6 (EMBL:AF302656) (255 aa) fasta scores: E(): 2.1e-90, 95.66% id in 254 aa, and to Erwinia chrysanthemi HrcJ SWALL:Q8KUL9 (EMBL:AF448202) (245 aa) fasta scores: E(): 5.5e-67, 75.94% DNA sequence : ATGAAAATAGATAAGCGAGTGTTGCTCCTGCTGATCGGATTATTGGCTGGCTGCGGTGAGCCGATTGAGCTGAATCGCGG GCTGTCGGAGAACGATGCCAACGAAGCGATTTCAATGCTTGGCCGCTATCAGATCGGTGCGGAGAAACGGGTTGAGAAAA CCGGCGTCACGCTGGTGATCGATGCAAAAAATATGGAACGCGCCGTCAACATTCTAAATGCGGCGGGTTTACCGAAGCAG TCGCGCACTAATCTGGGGGAAGTTTTTCAGAAAAGCGGTGTGATCTCGACGCCGCTGGAAGAGCGAGCCCGCTATATCTA TGCCTTGTCGCAGGAAGTCGAAGCGACGCTGGCGCAGATCGATGGCGTGATGGTGGCGCGAGTGCATGTGGTGTTGCCCG AGCGTATCGCGCCCGGCGAACCGGTTCAGCCCGCCTCAGCAGCGGTATTTATTAAATATCGTGCCGAACTGGAACCGGAT GGGATGGAGCCGCGTATCCGTCGGATGGTCGCCAGCAGTATTCCCGGTCTGTCTGGTAAGGACGATAAAGAACTGGCGAT CGTTTTTGTTCCGGCAGAACCGTATCAGGACACGATCCCCGTCGTTACGCTGGGGCCGTTCACGCTGACGCCGGATGAAA TGCGTCGTTGGCAGTGGAGCGCTGGGCTATTTGGCCTAGTGCTGGCTGGGCTATTAGGCTGGCGTATTGGCTCGCCTTAC CTGCGACAATGGCAGCAGAAAAAAGCGAGGGCGTCGTCGTCACAATGA Protein sequence : MKIDKRVLLLLIGLLAGCGEPIELNRGLSENDANEAISMLGRYQIGAEKRVEKTGVTLVIDAKNMERAVNILNAAGLPKQ SRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVMVARVHVVLPERIAPGEPVQPASAAVFIKYRAELEPD GMEPRIRRMVASSIPGLSGKDDKELAIVFVPAEPYQDTIPVVTLGPFTLTPDEMRRWQWSAGLFGLVLAGLLGWRIGSPY LRQWQQKKARASSSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 2e-70 | 72 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 5e-62 | 65 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 1e-59 | 63 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 1e-59 | 63 |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 4e-60 | 63 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 1e-55 | 62 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 8e-56 | 62 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 4e-58 | 61 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 6e-58 | 61 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 1e-55 | 61 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 1e-55 | 61 |
