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Name : hrcS (ECA2078) Accession : YP_050173.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 2367544 - 2367804 bp Length : 261 bp Strand : - Note : Similar to Erwinia amylovora HrcS SWALL:Q46647 (EMBL:L25828) (86 aa) fasta scores: E(): 2.8e-22, 76.19% id in 84 aa, and to Pantoea agglomerans HrcS protein HrcS SWALL:Q47857 (EMBL:X99768) (83 aa) fasta scores: E(): 2.6e-21, 75.61% id in 82 aa DNA sequence : ATGGAAATAATCACGCTTTTCCGTCAGGCCATGGTGATGGTCGTGCTGCTCTCTGCTCCGCCGCTGCTGGTTGCAGTGAT TGTCGGCGTGTTGATTTCACTGCTACAGGCGGTAATGCAATTGCAGGATCAGACGCTGCCCTTTGCCGTCAAACTGATCT CTGTCGGGCTGACGCTCGCGCTCTGTGGCCGCTGGATTGGCGTAGAGCTGATGCAATTAGCCATTACCGCGTTCAACATG ATTGCGCACACTGGGGTATAA Protein sequence : MEIITLFRQAMVMVVLLSAPPLLVAVIVGVLISLLQAVMQLQDQTLPFAVKLISVGLTLALCGRWIGVELMQLAITAFNM IAHTGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 7e-19 | 77 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 3e-18 | 74 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 1e-18 | 74 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 1e-18 | 74 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 1e-18 | 74 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 8e-16 | 66 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 8e-16 | 66 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-14 | 66 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 6e-14 | 66 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 1e-15 | 64 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 2e-15 | 64 |
