Gene Information

Name : pecM (ECA2035)
Accession : YP_050130.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Resistance
Product : regulatory protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5006
EC number : -
Position : 2317324 - 2318196 bp
Length : 873 bp
Strand : -
Note : Similar to Erwinia chrysanthemi PecM protein SWALL:PECM_ERWCH (SWALL:P42194) (297 aa) fasta scores: E(): 4e-39, 42.75% id in 276 aa

DNA sequence :
ATGAATACTCCATCCCCATCACACTATTGGCGTGACGTCATACTCACGGCGCTGGCTCCCGCGATTTGGGGGTCTACCTA
CATTGTGACATCAGAATTTTTGCCACCGGATCGCCCCTTCACGGCTGCGTTTATCCGTGTACTGCCTGCTGGCCTGCTGC
TACTTTTATTCACCCGCGTCTTTCCCGCTCGGCGAGACTGGTGGCGAGTGGTCGTGCTCAGCGCCCTGAATATCGGCGTT
TTTCAGGCACTGCTGTTCGTCGCGGCTTATCGTTTACCCGGCGGATTGGCTGCGGTACTTGGCGCTATCCAACCGCTGCT
GGTGATGGTGCTGGTCTGGGCGGTGGATCATCACGCTCCCAAGCTGGCCACGCTGTGGTCGGCGATAATCGGTGTGATTG
GCATGAGCATTTTGCTGCTGTCGCCGCAGACAACATTCGAGCCGGTGGGAATTGCCGCAGCGCTGCTGGGTGCGGTATGT
ATGGCGACGGGAGTCTGGCTGACGCGTCGCTGGCAGCTTGATTTACCCGTACTACCGCTTACCGGCTGGCAGCTCTTTAT
CGGTGGATTGATGCTTGCGCCCGTTGCGTGGCTAGCCGATGCGCCGCTGCCTACCTTGACTCTGTCGCAGTGGGCCGCTT
ACGCCTATCTCTGCCTCGCGGGTGCAGTGCTAGCTTATGGGCTCTGGTTTCGCGGCGTATCCCGTCTTCCAACGGTTGCC
GTTGCATCACTGGGATTATTGAGTCCGCTGACTGCCGTGCTGCTGGGTTGGGCGCTGCTTTCACAGTCGATGACCGGTAC
GGCATTTCTGGGCTTGGCGATCGTGTTAGCCAGCGTCTTCGCCGTGCAATGGACGACGGCACGAAGCAGGTAA

Protein sequence :
MNTPSPSHYWRDVILTALAPAIWGSTYIVTSEFLPPDRPFTAAFIRVLPAGLLLLLFTRVFPARRDWWRVVVLSALNIGV
FQALLFVAAYRLPGGLAAVLGAIQPLLVMVLVWAVDHHAPKLATLWSAIIGVIGMSILLLSPQTTFEPVGIAAALLGAVC
MATGVWLTRRWQLDLPVLPLTGWQLFIGGLMLAPVAWLADAPLPTLTLSQWAAYAYLCLAGAVLAYGLWFRGVSRLPTVA
VASLGLLSPLTAVLLGWALLSQSMTGTAFLGLAIVLASVFAVQWTTARSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM ACN81012.1 PecM Not tested AbaR5 Protein 2e-48 48
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 2e-48 48
pecM AGK07028.1 PecM Not tested SGI1 Protein 2e-48 48
pecM AGK07086.1 PecM Not tested SGI1 Protein 2e-48 48