Gene Information

Name : pykF (ECA1867)
Accession : YP_049964.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2120321 - 2121733 bp
Length : 1413 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGAAAAAGACAAAAATTGTTTGTACCATCGGGCCGAAAACAGAGTCAGAAGAAATGCTTGGCAACCTGCTGTCTGCCGG
CATGAATGTTATGCGCCTGAACTTCTCTCACGGGGATTACGTAGAACATGGCCAACGCATCAAGAACCTGCGTGCCGTCA
TGGAAAAAACCGGTCAGCAAGCGGCGATCCTGCTTGACACCAAAGGCCCAGAAATCCGCACCATGAAGCTGGAAAACGGC
GCTGACGTAACGTTGACCGCCGGTCAAACGTTCACGTTCACCACCGATCAGAGCATCGTGGGTAACAAAGATCGTGTCGC
AGTCACTTATGCTGGATTCACCGAAGACCTCAGCGTCGGTAACACCGTTCTGGTTGATGACGGTTTGATCGGTATGCAGG
TTACAGCGGTCAGCGGTAACGACGTCGTTTGTAAGGTGCTGAACAATGGCGATCTGGGCGAGAATAAAGGCGTTAACCTG
CCAGGCGTTTCCATCCAGTTACCTGCTCTGGCTGAAAAAGACAAACGCGACCTGATTTTCGGTTGCGAACAAGGTGTCGA
TTTCGTCGCAGCTTCCTTTATTCGTAAACGTTCCGACGTTGAAGAAATTCGCGCTCACCTGAAAGCACACGGTGGCGAGC
ACATCCAGATCATTTCCAAAATCGAAAATCAGGAAGGTCTGAACAATTTCGACGAAATTCTGGAAGCGTCTGACGGCATC
ATGGTTGCTCGTGGCGACCTGGGCGTTGAGATCCCAGTTGAAGAAGTGATCTTCGCACAGAAAATGATGATCGAAAAATG
TAACCTGGCTCGCAAAGTGGTGATCACCGCAACGCAAATGCTGGATTCAATGATCAAAAACCCACGTCCTACCCGTGCTG
AAGCTGGCGACGTGGCTAACGCCATCATCGACGGTACCGATGCCGTTATGCTGTCTGGCGAAAGTGCGAAAGGTAAATAC
CCGCTGGAATCCGTTACCATTATGGCGACGATCTGTCAGCGCACCGATTCCGTGATGAAAAGCCGTCTGGATACCATCAA
GACACCAGGAATACTGCGTATCACTGAAGCCGTCTGCCGTGGTGCAGTAGAAACCGCAGAAAAACTGGATGCACCGCTGA
TTGTGGTTGCGACCAGCGGCGGCAAGTCAGCCAAATCGATCCGTAAATACTTCCCGAATGCGCGCATTCTGGCGCTGACG
ACTAACGAAGTCACCGCGCGCCAGCTTCTGCTGAGCAAAGGCATTGATACGCTGCTGGTGAAGGAAATCGCCTCTACTGA
TGATTTCTACCGCATTGGTAAAGAAGCCGCGCTGAAGACCGGTCATGCGCAAGCTGGTGATGTTGTGGTGATGGTATCTG
GTGCACTGGTTTCCAGCGGCACAACCAACACTGCTTCCGTACATCGTCTCTGA

Protein sequence :
MKKTKIVCTIGPKTESEEMLGNLLSAGMNVMRLNFSHGDYVEHGQRIKNLRAVMEKTGQQAAILLDTKGPEIRTMKLENG
ADVTLTAGQTFTFTTDQSIVGNKDRVAVTYAGFTEDLSVGNTVLVDDGLIGMQVTAVSGNDVVCKVLNNGDLGENKGVNL
PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVEEIRAHLKAHGGEHIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIEKCNLARKVVITATQMLDSMIKNPRPTRAEAGDVANAIIDGTDAVMLSGESAKGKY
PLESVTIMATICQRTDSVMKSRLDTIKTPGILRITEAVCRGAVETAEKLDAPLIVVATSGGKSAKSIRKYFPNARILALT
TNEVTARQLLLSKGIDTLLVKEIASTDDFYRIGKEAALKTGHAQAGDVVVMVSGALVSSGTTNTASVHRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 86
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 86
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 86
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_049964.1 pyruvate kinase VFG0479 Protein 0.0 86