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Name : palI (ECA1850) Accession : YP_049947.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : sucrose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2097796 - 2099496 bp Length : 1701 bp Strand : - Note : Similar to Erwinia rhapontici sucrose isomerase PalI SWALL:Q9AI64 (EMBL:AF279281) (600 aa) fasta scores: E(): 1.7e-171, 70.25% id in 558 aa DNA sequence : ATGGTAGCCGTTAATGATGGCGTTTCTGCACATCCAGTGTGGTGGAAAGAAGCCGTATTCTATCAGGTTTATCCCCGATC ATTTAAAGACAGTGACGGTGACGGGATTGGCGATCTGAAAGGGCTGACTGAAAAACTCGATTATTTAAAAGCGCTCGGTA TTAATGCCATCTGGATTAATCCCCATTATGATTCGCCGAATACCGACAACGGCTACGATATTCGTGATTATCGCAAGATA ATGAAAGAATATGGCACAATGGATGACTTCGACCGACTCATTGCAGAAATGAAAAAGCGTGATATGCGATTAATGATAGA TGTTGTCGTTAATCACACCAGCGATGAGCATGAATGGTTTGTCGAAAGTAAAAAATCAAAAGATAATCCTTATCGCGACT ATTATATTTGGCGCGATGGCAAAGATGGCACACAGCCTAATAATTACCCCTCCTTCTTCGGCGGTTCCGCCTGGCAGAAA GATAACGCAACACAGCAATATTATCTGCACTATTTTGGCGTACAGCAGCCCGATCTGAATTGGGATAATCCCAAAGTACG TGAAGAAGTGTACGACATGCTGCGTTTCTGGATTGATAAAGGGGTTTCTGGGCTGCGTATGGATACCGTGGCAACCTTTT CCAAGAACCCGGCTTTCCCCGACCTGACGCCAAAGCAACTGCAAAACTTTGCCTACACCTACACGCAGGGCCCTAATCTG CATCGTTACATTCAGGAAATGCACCAAAAAGTGCTGGCAAAATATGACGTCGTTTCCGCAGGTGAAATTTTCGGTGTACC GCTGGAGGAAGCGGCCCCGTTTATCGATCAGCGCCGTAAAGAGCTCGATATGGCCTTCTCATTCGATCTTATCCGTCTCG ATCGCGCCGTAGAGGAAAGATGGCGGCGGAATGACTGGACGTTGTCCCAGTTCCGTCAGATCAACAATCGACTGGTTGAT ATGGCCGGGCAACATGGCTGGAATACCTTCTTCCTGAGCAACCATGACAACCCGCGTGCGGTATCACACTTCGGTGACGA TCGCCCAGAGTGGCGCACCCGTTCCGCTAAAGCACTGGCGACGTTGGCGTTAACGCAGCGCGCAACTCCGTTTATTTATC AAGGAGACGAATTGGGCATGACCAACTACCCGTTTACGTCCTTGTCTGAATTCGATGACATTGAAGTTAAAGGCTTCTGG CAGGACTTTGTAGAGACAGGAAAAGTGAAACCTGATGTCTTCCTGGAAAACGTAAAACAAACCAGCCGCGATAACAGTCG CACACCGTTCCAATGGAGCAATACGGCACAGGCAGGCTTTACTACAGGTACTCCCTGGTTCCGTATTAACCCCAACTATA AGAACATCAATGCAGAGGAGCAAACGCAAAATCCAGACTCCATCTTCCATTTCTATCGTCAACTGATCGAATTACGTCAT GCTACACCAGCGTTCACCTACGGAACTTATCAGGATCTTGATCCGAATAATAACGAGGTACTTGCTTATACTCGTGAACT CAATCAGCAACGTTATCTGGTTGTGGTGAACTTTAAAGAAAAACCCGTGCATTACGTTCTGCCGAAAACACTTTCCATCA AACAGTCTTTACTGGAAAGCGGGCAAAAAGACAAAGTAGAACCAAACGCGACGACGCTTGAATTACAGCCGTGGCAATCT GGGATTTATCAGTTGAACTAA Protein sequence : MVAVNDGVSAHPVWWKEAVFYQVYPRSFKDSDGDGIGDLKGLTEKLDYLKALGINAIWINPHYDSPNTDNGYDIRDYRKI MKEYGTMDDFDRLIAEMKKRDMRLMIDVVVNHTSDEHEWFVESKKSKDNPYRDYYIWRDGKDGTQPNNYPSFFGGSAWQK DNATQQYYLHYFGVQQPDLNWDNPKVREEVYDMLRFWIDKGVSGLRMDTVATFSKNPAFPDLTPKQLQNFAYTYTQGPNL HRYIQEMHQKVLAKYDVVSAGEIFGVPLEEAAPFIDQRRKELDMAFSFDLIRLDRAVEERWRRNDWTLSQFRQINNRLVD MAGQHGWNTFFLSNHDNPRAVSHFGDDRPEWRTRSAKALATLALTQRATPFIYQGDELGMTNYPFTSLSEFDDIEVKGFW QDFVETGKVKPDVFLENVKQTSRDNSRTPFQWSNTAQAGFTTGTPWFRINPNYKNINAEEQTQNPDSIFHFYRQLIELRH ATPAFTYGTYQDLDPNNNEVLAYTRELNQQRYLVVVNFKEKPVHYVLPKTLSIKQSLLESGQKDKVEPNATTLELQPWQS GIYQLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-121 | 49 |
