|
Name : ECA0176 (ECA0176) Accession : YP_048303.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 196154 - 196633 bp Length : 480 bp Strand : + Note : Similar to Yersinia pestis hypothetical protein ypo2962 SWALL:Q8ZCM0 (EMBL:AJ414154) (161 aa) fasta scores: E(): 2e-36, 56.6% id in 159 aa, and to Escherichia coli O6 conserved hypothetical protein c3767 SWALL:AAN82211 (EMBL:AE016766) (159 aa) fasta score DNA sequence : ATGGCGAATAATATTTATTTGACCTTGACGGGTAATCAGCAGGGGGAAATATCTGCTGAGTGTGGCACTGTTGATTCGAT TGGGAATAAATATCAGATAGGGCATAGAGACCAAATCTTTGTGTTGCAATTTGATCATTCTATCAGCCGAAACCAAAACA TTAATCATCAACCTATAACATTTTGTAAGCCTATCGATAAGTCTTCTCCGCTTCTGGGAAATGCCATATCAAACAACGAA AAGCTTGAGCTTTTGTTCGATTTTTACCGTACGGCGCAGACTGGCACGCAGGAAAAATATTATTCTGTAAAACTCCTTGG AGCCGTTATAAGGAAAATTGCCGTTTCCTATCCGCATGCTTTGACCCATGCAGAGAACCAACCAGAAGAAATGATATCTA TTGCGTATCAAAGCATAGATTGGCAACACCATATCGCTGGAACTGGTGGTTATAGCTTATGGGAAGAAAAAGTATACTAA Protein sequence : MANNIYLTLTGNQQGEISAECGTVDSIGNKYQIGHRDQIFVLQFDHSISRNQNINHQPITFCKPIDKSSPLLGNAISNNE KLELLFDFYRTAQTGTQEKYYSVKLLGAVIRKIAVSYPHALTHAENQPEEMISIAYQSIDWQHHIAGTGGYSLWEEKVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec32 | YP_851413.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 4e-38 | 52 |
| aec32 | AAQ96726.1 | Aec32 | Not tested | AGI-1 | Protein | 3e-38 | 52 |
| orf23 | AAO17189.1 | Orf23 | Not tested | tcd island | Protein | 3e-36 | 47 |
