|
Name : ECA1653 (ECA1653) Accession : YP_049752.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1903090 - 1903356 bp Length : 267 bp Strand : - Note : Similar to Escherichia coli O6 transposase c2472 SWALL:AAN80931 (EMBL:AE016762) (88 aa) fasta scores: E(): 2e-22, 72.72% id in 88 aa, and to Yersinia pestis, and Yersinia pseudotuberculosis low calcium response locus protein S LcrS or ypcd1.63 or y5015 or DNA sequence : ATGAAGAAAGCGCGTTTCACTGAGACTCAGATCCTGCGGGTTTTGAAAGAAGTTGAAGGTGGTCGGCATGTGAAGGATGT GTGCCGTGAAAACGGTGTGTCGGAAGCCAGCTATTACAACTGGAAATCTAAATACGGCGGCATGGAGTCCTCTGATATCA AACGGATGAAAGAGTTGGAAGAGGAAAATCGCCGGTTAAAGCAAATGTACGCATCCCTGAGCTTAGATCATGAAATTCTT AAGGATGTTGTTTCAAAAAAACTTTAA Protein sequence : MKKARFTETQILRVLKEVEGGRHVKDVCRENGVSEASYYNWKSKYGGMESSDIKRMKELEEENRRLKQMYASLSLDHEIL KDVVSKKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400A | CAB46581.1 | IS1400 transposase A | Not tested | HPI | Protein | 3e-28 | 71 |
| tnp | AAL78293.1 | putative truncated transposase | Not tested | Hrp PAI | Protein | 8e-21 | 56 |
| XCV0438 | YP_362169.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 1e-20 | 56 |
| unnamed | ABR13351.1 | insertion sequence IS407 OrfA | Not tested | PAGI-5 | Protein | 9e-18 | 53 |
| unnamed | ABR13539.1 | insertion sequence IS407 OrfA | Not tested | PAGI-8 | Protein | 9e-18 | 53 |
| EXA9 | ABD94680.1 | IS407 transposase OrfA | Not tested | ExoU island A | Protein | 2e-17 | 52 |
| unnamed | AAK01522.1 | transposase A | Not tested | PAGI-1 | Protein | 2e-17 | 52 |
