Gene Information

Name : traR (ECA1625)
Accession : YP_049726.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Unknown
Product : conjugal transfer protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 1880218 - 1880427 bp
Length : 210 bp
Strand : -
Note : Similar to Escherichia coli TraR protein TraR SWALL:TRAR_ECOLI (SWALL:P41065) (73 aa) fasta scores: E(): 1e-06, 41.66% id in 72 aa

DNA sequence :
ATGCCGGATGAGATCGATCGCGATCAGGAATTTAATGAACAGCGGCTGGAAGAGATGATTGAACAGAACCGTTTCAAACC
AGCGATAACGCCTTCATTATTTCACTGTCAATTTTGCGGTAACCCTATTCCTGAGAAAAGGCGGGAAACGCTCCCTGGGG
TGAGCACATGTACAGAATGCCAGTCCATCCTTGAACGACGCAGGCGTTGA

Protein sequence :
MPDEIDRDQEFNEQRLEEMIEQNRFKPAITPSLFHCQFCGNPIPEKRRETLPGVSTCTECQSILERRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y2408 NP_669715.1 hypothetical protein Not tested HPI Protein 8e-21 74
YPTB1587 YP_070115.1 hypothetical protein Not tested HPI Protein 8e-21 74
unnamed CAA21401.1 - Not tested HPI Protein 8e-21 74
unnamed CAB46597.1 hypothetical protein Not tested HPI Protein 6e-21 74