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Name : virB8 (ECA1616) Accession : YP_049716.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : conjugal transfer protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3736 EC number : - Position : 1871087 - 1871770 bp Length : 684 bp Strand : - Note : Similar to Escherichia coli VirB8 protein VirB8 SWALL:Q91UW9 (EMBL:AJ297913) (236 aa) fasta scores: E(): 2.8e-14, 29.46% id in 224 aa DNA sequence : ATGCCTGACGTTCAGAAAATCATCAATGCATCCCGCTCATTTGAATCCATCATGCTGGAAAAGGAGGAGCGTACCAGGAA GACTGCATGGGCTATGGCGGCGGTCGGATTTACGCTGGCCGGACTGGCGATAGCCGCCGTGATTATTCTGCTGCCGCTGA AAACCACCGAAATCGAATTATGGTCAGTGGATAAACAGACCGGGCGCTATGAATACATGACCCGCATTAAAGAGCGGGAT ATTTCCACCGAGGAAGCGCTGGCGCATTCGCTGGCGGCGCATTACGTCACCCTGCGCGAAGGGTATAACTATTTTTCTCT TCAGCGCGATTACGATGACGTGCAGTTATTCAACAGCGACAGCGTCAATAAAGAGTATCTGGACGGATTTAACGGTGACC AGGCACCGGATGTCATTTTCCATAAGGCGGACTATGTCGTTTCTGTCGACACTATTTCCAACGTCCATGCTCCCGCAACG GCTCCCGATCGCCTGGCCACCCTGCGGATTAAGCGCACCCTTCGCCGCATTGCAGATAATTCGGTAAAAACGGATTTCTG GAATATCCGCCTGACCTGGCGCTACCTTCCCCGCAAACAGCTGACGGACAGTCAGCGAGAAGTGAACCCGCTGGGGTTCA TTGTCACCAGTTACCAGCGCGATAAAGAACTGAGGAGCGAATGA Protein sequence : MPDVQKIINASRSFESIMLEKEERTRKTAWAMAAVGFTLAGLAIAAVIILLPLKTTEIELWSVDKQTGRYEYMTRIKERD ISTEEALAHSLAAHYVTLREGYNYFSLQRDYDDVQLFNSDSVNKEYLDGFNGDQAPDVIFHKADYVVSVDTISNVHAPAT APDRLATLRIKRTLRRIADNSVKTDFWNIRLTWRYLPRKQLTDSQREVNPLGFIVTSYQRDKELRSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70301.1 | PilX8-VirB8-like protein | Not tested | HPI | Protein | 1e-39 | 43 |
