Gene Information

Name : arsB (ECA1604)
Accession : YP_049704.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 1860786 - 1862075 bp
Length : 1290 bp
Strand : -
Note : Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri arsenical pump membrane protein ArsB or ArsF or b3502 or z4904 or ecs4374 or sf3535 SWALL:ARSB_ECOLI (SWALL:P37310) (429 aa) fasta scores: E(): 1.3e-139, 85.54% id in 429 aa

DNA sequence :
ATGTTACTGGCAGGGAATATCTTTTTACTGACGCTGGTTCTGGTCATCTGGCAGCCTGGAGGCCTCAGTATTGGCTGGAG
TGCAAGTATCGGAGCCTTACTGGCGCTGGGAACTGGGGTCATCCACATGGGTGATATCCCCGTGGTCTGGAATATCGTCT
GGAATGCGACAGCGGCATTCATTGCGGTGATCATCATCAGCCTGCTGCTCGATGAGTCCGGTTTCTTTGAATGGGCCGCG
CTGCATATCGCCCACTGGGGTAACGGACGTGGACGCCTGCTGTTTACCTGGATAATTCTGCTCGGTGCCGCTGTTGCTGC
GCTCTTTGCTAACGATGGTGCAGCGCTGATCCTGACACCAATTGTGATTGCGATGCTGCTCGCGCTGGGGTTCAGCCAGA
GCACGACGCTGGCCTTTATCATGGCTGCGGGATTCATCGCCGATACCGCCAGTCTGCCGCTCATCGTCTCTAACCTTGTG
AATATTGTCTCGGCGGATTTCTTTGGCCTGAGCTTTACGCGGTACGCCTCCGTGATGGTCCCCGTGAATCTGGCAGCCAT
TGCCGCCACGCTGCTCATGCTGCATCTCTTCTTCCGTCGGGATATTCCGGCGACATATGATGTTTCATTGCTGAAAGTGC
CTGCCAGTGCGATTAAAGATCCGGCGACGTTCAGAGCCGGCTGGATTGTTCTGCTGCTCCTGCTTCTCGGGTTCTTTGTT
CTGGAGCCGCTGGGGGTCCCCGTCAGCGCAATAGCGGCAGCTGGCGCAGCCGTGCTATTTGTGGTGGCAAAGAGAGGCCA
TGCCCTTAATACCGGGAAAGTGCTGCGCGGTGCGCCCTGGCAGATCGTTATTTTCTCGCTGGGGATGTACCTGGTCGTCT
ACGGTCTGCGCAATGCCGGACTCACTGAGTTTCTTTCTGACGTGCTTAATAGGCTGGCAGAGAGAGGTCTATGGGCTGCC
ACGTTTGGTACCGGCTTCCTGACGGCGTTTATGTCGTCGGTGATGAACAATATGCCGACGGTGCTGATTGGCGCACTGTC
GATTGACGGGAGTGCTGCGACCGGCATCGTCAAAGAGGGGATGATTTATGCCAATGTGATTGGTTGCGATTTAGGCCCAA
AAATCACCCCGATTGGCAGTCTGGCCACTCTGCTGTGGCTTCATGTGCTGGCTCAGAAAAACATGACCATCACCTGGGGC
TATTACTTCCGCACCGGGATTATCATGACCCTACCCGTGCTGTTTGTCACACTGGCCGCGCTGACGTGGCGGCTCTCTGT
CACTTTGTAA

Protein sequence :
MLLAGNIFLLTLVLVIWQPGGLSIGWSASIGALLALGTGVIHMGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAA
LHIAHWGNGRGRLLFTWIILLGAAVAALFANDGAALILTPIVIAMLLALGFSQSTTLAFIMAAGFIADTASLPLIVSNLV
NIVSADFFGLSFTRYASVMVPVNLAAIAATLLMLHLFFRRDIPATYDVSLLKVPASAIKDPATFRAGWIVLLLLLLGFFV
LEPLGVPVSAIAAAGAAVLFVVAKRGHALNTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEFLSDVLNRLAERGLWAA
TFGTGFLTAFMSSVMNNMPTVLIGALSIDGSAATGIVKEGMIYANVIGCDLGPKITPIGSLATLLWLHVLAQKNMTITWG
YYFRTGIIMTLPVLFVTLAALTWRLSVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 3e-156 86
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-104 60
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-102 58
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-102 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_049704.1 arsenical pump membrane protein BAC0577 Protein 5e-157 88
arsB YP_049704.1 arsenical pump membrane protein BAC0031 Protein 9e-156 86
arsB YP_049704.1 arsenical pump membrane protein BAC0578 Protein 7e-155 86
arsB YP_049704.1 arsenical pump membrane protein BAC0576 Protein 6e-156 86
arsB YP_049704.1 arsenical pump membrane protein BAC0574 Protein 1e-104 60
arsB YP_049704.1 arsenical pump membrane protein BAC0575 Protein 1e-104 59