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Name : radC (ECA0145) Accession : YP_048273.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : DNA repair protein RadC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2003 EC number : - Position : 166978 - 167643 bp Length : 666 bp Strand : + Note : Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase DNA sequence : ATGGGTTGGGAAAAGGGATTGGCACCGCGTGAAAAACTGGTGCGTTTAGGCGCGGAATCACTGACGGATGCCGAACTGTT GGCGATTTTTTTACGCACAGGGTTGCCCGGTGTGCATGTGATGCAGTTGGCAGAGAATTTGTTGGCGCAGTTTGGGTCGT TATATCAACTGATGACGGCCGAGCAGTCCGCGTTCCATAACGCCAGAGGGGTGGGAATATCAAAATATACGCAAATCAAG GCGATCGCAGAGCTGTCGCGGCGGTTGTTTTTCTCCCGCCTGGCGAAAGAGGATGCGATGCTAAACCCAGAAGCGACTGG TCAATATTTGCAGTTGCTACTGTCGCGACGTGAGCGCGAGGTTTTTTTAGTCCTGTTTTTGGATAATCAGCATCACGTTA TTCGCCATCAGGAGATGTTTGTTGGTACGATTAACAGCGTAGAAGTACACCCGCGTGAAATTGTGCGTGAAGCGCTAAAG GCGAATGCCGCTGCGCTGATTTTGGCGCATAATCACCCGTCGGGAAAAGCGGAGCCGAGTCAGGCTGACCGTGCGATAAC CGAACAGATTGTCAAAGCGTGCCTATTACTGGAGATCCGCGTGCTCGATCATTTAGTGATTGGGCATGGTGAATTCGTTT CTTTTGCCGAGCGCGGCTGGATTTGA Protein sequence : MGWEKGLAPREKLVRLGAESLTDAELLAIFLRTGLPGVHVMQLAENLLAQFGSLYQLMTAEQSAFHNARGVGISKYTQIK AIAELSRRLFFSRLAKEDAMLNPEATGQYLQLLLSRREREVFLVLFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALK ANAAALILAHNHPSGKAEPSQADRAITEQIVKACLLLEIRVLDHLVIGHGEFVSFAERGWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0510 | NP_230161.1 | DNA repair protein RadC-like protein | Not tested | VSP-2 | Protein | 3e-21 | 44 |
