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Name : ECA0138 (ECA0138) Accession : YP_048266.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 159155 - 161014 bp Length : 1860 bp Strand : - Note : Similar to Salmonella typhimurium ATPase components of ABC-type transport system, containing duplicated atpase domain YliA SWALL:Q8ZQM4 (EMBL:AE008735) (623 aa) fasta scores: E(): 1.3e-118, 57% id in 607 aa, and to Escherichia coli hypothetical ABC transp DNA sequence : ATGCACGCGGGTGCCGCCACAGCACCCGGTAACGCCCCCCGACCTGTACTGGAAATCGACGACCTGAGCGTCAGCTTTAG CGGCCGTTCCGGTACGCATCAGGCGCTAAAAGGCATTTCCTTTACCGTTAATAAAGGGGAAGTGGTCGCCGTGGTCGGCG AAAGTGGTTCAGGCAAATCCGTGACGTCACTTGCCGTGATGGGGCTGCTGGCGGACTCTGCCAACATCGAACGCGGCGCA CTCCGTTTCACCGCACGCGACGGCAAGCAGCATGACCTGCTGAGTATGAAAGCAGAAGCACGTCGTAAGCTGCGCGGGCG CGATCTCGCCATGATTTTCCAGGAGCCGATGACGTCACTCAATCCGGTGCTGAAAGTCGGCGATCAGCTCACGGAAGCCC TGCTTGACCACAAAATCTGTGATGCCGCCAGCGCAGACAAAAAAGCGCGTGAGCTGCTACATAAAGTGCGTATCGCTGAC GTCGATCGCGTGATGAAAAGCTACCCGCACTCACTGTCCGGCGGGATGCGCCAGCGTGTGATGATTGCTCAGGCGCTGGC CTGCGATCCGCAGCTATTGATTGCCGATGAACCCACCACCGCGCTGGATGTCACCGTGCAGGCTCGCATTCTGCAAATCC TGCGTGACCTGCAACAGCAGAGCGACATGTCAGTACTGTTTATCACCCACGATATGGGCGTGGTCGCGGAAATCGCCGAC CGCGTGGTAGTGATGTATCGCGGCGAGATCGTAGAGCAAGGCACTGTTGAGCAGATTTTCGCTGCACCGCAACATCCTTA TACCCAGTCGCTGCTAGCCGCCGTACCGAAACTAGGCGACATGCGCGATAGCCTGTGGCCGAAGCGCTTCCCACTGTTGG GACAGGCTGCCGACCCGCAAGAAAGTGAGCAGGTCACCGCACGTTATGACGCCGAGCCGCTGTTGGATATTCGCGGGCTG AGCGTGTATTACCCCATGCGTAGCGGGATTTTCTCCACCATCACCCATCACGTTCATGCGGTAGAACAGATCGATTTCAA CGTCTGGCCGGGCGAAACGCTGGCTATCGTTGGCGAAAGCGGCTGCGGCAAATCCACCACCGGACGCGCCCTCCTGCGTC TGGTACAGAGCGAAGCCGAGAGCATTCATTTTCAGGGCAACGAAATTTCTCAGATGAAAGAGCGTGATTTCCAGCCGCTA CGTCGGGAAATGCAGATGGTGTTTCAAGACCCCTATGCCTCGCTCAATCCACGTCTGACGGTCGGCTTCACTATCGCCGA ACCACTGCTCTTGCACGGGCTGGTGAAATCGCTGGAAGAGGCGACGCCGCAAGTGCAGGCGCTGCTCAAAAGCGTTGGGC TGCTGCCTGAACACGCGCGCCGTTATCCGCATGAGTTTTCCGGCGGACAACGTCAGCGTATCGCGATTGCCCGAGCGATG GCGTTGCAGCCGCAGGTCATCATTGCTGACGAAGCCGTTTCGGCGCTCGATGTGTCGATTCAGGCGCAGGTCGTCAACCT GATGATGGATCTCCAGAAAAAAACCGGCGTGTCGTGGATTTTCATCTCACACGATATGGCGGTGGTCGAACGTATCGCCA ACCGCGTCGCGGTGATGTACCTCGGCCAGATTGTGGAGATCGGCCCGCGTCAGTCGGTGTTTAACGACCCACAGCATCCG TACACCCGCCGCCTGTTGGCCTCGGTTCCGATTGCCGATCCAACCCGTCGCGGCGCACGCCAATTTGACGACAGCGAAAT CCCCTCTCCCTTGCGTAAAGCAGGTGAGGTGGTCGCCAAAATGCGCTACCGAGAGGTTGCGCCGCAGCACTGGGTCGCCG ACAACGAATCGGCTGCCTGA Protein sequence : MHAGAATAPGNAPRPVLEIDDLSVSFSGRSGTHQALKGISFTVNKGEVVAVVGESGSGKSVTSLAVMGLLADSANIERGA LRFTARDGKQHDLLSMKAEARRKLRGRDLAMIFQEPMTSLNPVLKVGDQLTEALLDHKICDAASADKKARELLHKVRIAD VDRVMKSYPHSLSGGMRQRVMIAQALACDPQLLIADEPTTALDVTVQARILQILRDLQQQSDMSVLFITHDMGVVAEIAD RVVVMYRGEIVEQGTVEQIFAAPQHPYTQSLLAAVPKLGDMRDSLWPKRFPLLGQAADPQESEQVTARYDAEPLLDIRGL SVYYPMRSGIFSTITHHVHAVEQIDFNVWPGETLAIVGESGCGKSTTGRALLRLVQSEAESIHFQGNEISQMKERDFQPL RREMQMVFQDPYASLNPRLTVGFTIAEPLLLHGLVKSLEEATPQVQALLKSVGLLPEHARRYPHEFSGGQRQRIAIARAM ALQPQVIIADEAVSALDVSIQAQVVNLMMDLQKKTGVSWIFISHDMAVVERIANRVAVMYLGQIVEIGPRQSVFNDPQHP YTRRLLASVPIADPTRRGARQFDDSEIPSPLRKAGEVVAKMRYREVAPQHWVADNESAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-82 | 41 |
