Gene Information

Name : ECA1347 (ECA1347)
Accession : YP_049453.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 1526672 - 1527400 bp
Length : 729 bp
Strand : -
Note : Similar to Synechococcus elongatus ABC transporter ATP-binding protein tll1492 SWALL:BAC09044 (EMBL:AP005374) (373 aa) fasta scores: E(): 5.2e-35, 50.21% id in 233 aa, and to Bradyrhizobium japonicum ABC transporter ATP-binding protein bll7196 SWALL:BAC52

DNA sequence :
ATGGATATCGCCTCCCGTTATTGCGCGGAGGTGATAATGACCACGGCTGAACTCGCCACGCCCGCTGCGATTGCGATCGA
TAAATTATCCCACGCTTTCGCAGGAAAAACGGTTCTCGACTCGATCTGCCTCAATGTGTCGAGAGGCACCATTCTGGCCT
TGCTGGGGCCTTCCGGCTGCGGCAAAAGTACGTTGCTAAAATTGCTGGCTGGGTTGTTACAACCAGATGCAGGCACCATT
CATTTTGGCGATCGTCAGGTTGCCGGTCATCAGCTATCCCTACCGCCTGAACAACGCAATCTTGGCATGGTATTTCAGGA
CTACGCACTGTGGCCACATATGACCGTGGCACAAAACGTCGGGTTTCCGCTGCTGATGAGGAAGGTTCCGCGCGATATCT
GCCGCCAACGAGTTGACGTCACGCTAGCGCGCGTAGGTCTGGCCGATTTTGCCGATCGTAAACCTGCCGATTTATCCGGC
GGTCAGCAACAGCGAGTCGCGTTGGCACGCGCCATTATCGCAGAGCCGAACATCCTGCTATTTGATGAACCGTTATCCAA
TCTCGACCGGGATCTACGTGAATCGCTTTGTCAGGAGATGGCATCGCTCTTACGCCATCTTGGTACCACCGCCGTGTATG
TCACCCACGACAGAGGCGAAGCCAACATACTGGCGCACCGTATTGTTCACATGTCGCAAGGCTACATTACTGATATCACC
ACACGTTAA

Protein sequence :
MDIASRYCAEVIMTTAELATPAAIAIDKLSHAFAGKTVLDSICLNVSRGTILALLGPSGCGKSTLLKLLAGLLQPDAGTI
HFGDRQVAGHQLSLPPEQRNLGMVFQDYALWPHMTVAQNVGFPLLMRKVPRDICRQRVDVTLARVGLADFADRKPADLSG
GQQQRVALARAIIAEPNILLFDEPLSNLDRDLRESLCQEMASLLRHLGTTAVYVTHDRGEANILAHRIVHMSQGYITDIT
TR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-25 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECA1347 YP_049453.1 ABC transporter ATP-binding protein BAC0600 Protein 2e-24 43