|
Name : kdpA (ECA1342) Accession : YP_049448.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 1521280 - 1522968 bp Length : 1689 bp Strand : - Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGCCGCTGACGCTTTTTTACTGATCTTTGGTCTGCTGCTTACGGTGCTGATCGTCGCCCAGCCGTTAGGTAGCGGACT GGCTCGTCTGATTGAGGGCGAAACAGGGACGCTCCTGCAAAAATTCGAAACGAAGACGGCGCGCTTCTTCGCTCTGGATA CAACGGAGATGCGCTGGCAGCAGTATGCTGCGGCTATTCTGGCGCTTAACCTGATCGGCATTGTCGTCCTGTTTGTACTG CTAATGGCTCAGGGCAATCTGCCGCTTAACCCAGAAAATATGCCGGGGCTATCGTGGCATTTAGCGTTAAACACGGCAGT CAGCTTTGTCACCAACACCAACTGGCAGGCTTACAGCGGTGAAAACACGCTGAGCTACCTGAGCCAGATGGTCGGACTAA CGGTACAAAACTTCCTTTCCGCCGCCAGCGGTATTGCAGTGGCCTTCGCGTTAATCCGCGCATTTTCCCGTCGCTGTGTC GATACGCTGGGCAACGCATGGCTCGATCTGTTGCGTATCACGCTGTACGTGTTACTGCCGCTGTCCCTGCTGTTGGCGCT GTTCTTCGTCAGTCAGGGTGTGTTGCAAAACCTGCTGCCTTACCAGCACCTGACCACGCTGGACGGCGCAGCCCAAACGC TGCCAATGGGCCCTGTTGCCTCACAGGAAGCGATTAAATTGCTGGGCACCAACGGTGGCGGCTTCTTTGGCGCAAATTCG GCGCATCCGTTTGAAAACCCGACGGCACTCAGCAACATCGTACAAATGCTGGCGATCCTGCTGATTCCTACGGCGCTGTG CTTCGCTTTTGGTAAAGCCGTCAGCGACAAGCGTCAGGGTCATGCGCTGCTGTGGGCGATGGCACTGATCTTTATCGTCG CAGCTGCCGTAGTGATGAAAATGGAGGTCACCGGTAACCCACATCTGCTGGCATTAGGGGCGGACAGCGCGGCAAATCTG GAAGGCAAAGAGACACGTTTTGGCGTTCTGACTTCCAGCCTGTATGCCGTTGTCACCACGGCGACGTCGACAGGTGCAGT GAACGCCATGCACGACTCCTTCACGGCACTCGGCGGTATGGTTCCCCTGTGGCTGATGCAGATTGGTGAAGTGGTGTTCG GCGGCGTCGGCTCTGGGTTGTACGGCATGCTGTTGTTCGTACTTCTGACCGTCTTTATCGCTGGCCTGATGATTGGTCGT TCACCGGAATATCTGGGCAAAAAGATCGAAGTCTATGAGATGAAGATGACGGCACTGGCGATTCTGATTCCCCCCGCACT GGTGTTGCTCGGCACCGCGCTGGCGCTGAGTACAGAAGCCGGACGCGGCGGCATTCTGAACCCCGGCGCACACGGCTTTA GCGAAGTGCTCTATGCCGTATCTTCCGCCGCGAACAACAACGGCAGTGCGTTTGCTGGCCTGAGCGTCAATACGCCGTTC TATAACGTCTTGCTCGCTGTCGCCATGCTGCTGGGTCGCTTTGCCGTTATGGTGCCCGTGCTGGCGATCGCCGGTTCGCT GGTCGTGAAAAAGCGCCAGCCGGAAAGCAAAGGCTCGCTGTCTACCCGCAGTCCGCTGTTTATCGGCATGCTCATCGCCA TCGTTCTGCTGATTGGTGCGCTGACATTTATCCCTGCACTGGCGTTAGGGCCAGTTGCTGAACATTTACAGTTCGGCCTG ACTCACTAA Protein sequence : MAADAFLLIFGLLLTVLIVAQPLGSGLARLIEGETGTLLQKFETKTARFFALDTTEMRWQQYAAAILALNLIGIVVLFVL LMAQGNLPLNPENMPGLSWHLALNTAVSFVTNTNWQAYSGENTLSYLSQMVGLTVQNFLSAASGIAVAFALIRAFSRRCV DTLGNAWLDLLRITLYVLLPLSLLLALFFVSQGVLQNLLPYQHLTTLDGAAQTLPMGPVASQEAIKLLGTNGGGFFGANS AHPFENPTALSNIVQMLAILLIPTALCFAFGKAVSDKRQGHALLWAMALIFIVAAAVVMKMEVTGNPHLLALGADSAANL EGKETRFGVLTSSLYAVVTTATSTGAVNAMHDSFTALGGMVPLWLMQIGEVVFGGVGSGLYGMLLFVLLTVFIAGLMIGR SPEYLGKKIEVYEMKMTALAILIPPALVLLGTALALSTEAGRGGILNPGAHGFSEVLYAVSSAANNNGSAFAGLSVNTPF YNVLLAVAMLLGRFAVMVPVLAIAGSLVVKKRQPESKGSLSTRSPLFIGMLIAIVLLIGALTFIPALALGPVAEHLQFGL TH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 2e-77 | 53 |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 2e-77 | 53 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 6e-63 | 47 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 7e-63 | 47 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 7e-63 | 47 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 7e-63 | 47 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 7e-63 | 47 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 1e-63 | 47 |
