|
Name : kdpE (ECA1338) Accession : YP_049444.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : DNA-binding transcriptional activator KdpE Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1514879 - 1515559 bp Length : 681 bp Strand : - Note : response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport DNA sequence : TTGCAGGCCACTATTCTGATCGTCGAAGATGAAAAAGAGATCCGTCGTTTTGTACGTCAGGCGCTGGAAGGCGAAGGCTG TCGCGTGTTTGACGCAGAAACGATGCAGCGCGGCCTGTTAGAAGCGGCCACGCGCAAACCCGATCTGATTATTCTCGATT TAGGCCTGCCGGACGGCAGTGGCATCGACTACATTCGCGATTTACGCCAGTGGAGCAGCCTGCCCGTGATTGTGCTTTCT GCCCGTACCGACGAGCAGGATAAAATAGGTGCTCTGGACGCGGGGGCCGATGATTACCTGACCAAACCGTTCGGCATCGG TGAACTGCTAGCACGATTGCGCGTGGCACTGCGGCGCCACAGCAATACCCAGCAGGAAACGCCGCTGGTGAGTTTCGGTA CGATCACCGTTGATTTACTTAACCGGCAAGTAAATCGCGATGGTCAGGAATTGCACCTGACGCCCATCGAATTTCGTCTG CTGGCAACCTTACTCGCTAACCCCGGCAAGGTGCTGACGCAGCGCCAACTCCTGACGCAAGTCTGGGGGCCTAACGCCGT CGAGCACAGCCACTATCTGCGTATTTACATGGGGCATCTGCGCCAGAAGCTGGAAAGCGACCCCGCCAGACCGCGCCATC TATTGACTGAAACCGCTATCGGTTATCGATTTATGCCGTAA Protein sequence : MQATILIVEDEKEIRRFVRQALEGEGCRVFDAETMQRGLLEAATRKPDLIILDLGLPDGSGIDYIRDLRQWSSLPVIVLS ARTDEQDKIGALDAGADDYLTKPFGIGELLARLRVALRRHSNTQQETPLVSFGTITVDLLNRQVNRDGQELHLTPIEFRL LATLLANPGKVLTQRQLLTQVWGPNAVEHSHYLRIYMGHLRQKLESDPARPRHLLTETAIGYRFMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 3e-26 | 42 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 2e-26 | 42 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-18 | 42 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 6e-18 | 41 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 8e-18 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 8e-18 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 8e-18 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 8e-18 | 41 |
