Gene Information

Name : phoB (ECA1110)
Accession : YP_049216.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : phosphate regulon response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1260789 - 1261478 bp
Length : 690 bp
Strand : +
Note : Similar to Escherichia coli, and Escherichia coli O157:H7 phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 1.5e-81, 89.08% id in 229 aa, and to Yersinia pest

DNA sequence : 
ATGGCAAAACGCATATTAGTCGTGGAAGATGAAGCACCAATTCGTGAAATGGTCTGCTTTGTACTGGAACAAAATGGTTA
TCAACCCGTTGAAGCCGAAGATTATGACAGTGCGGTAACGCAACTGTCGGAGCCGTTCCCAGAACTGGTGTTATTGGACT
GGATGCTGCCAGGAGGTTCGGGCCTGCAATTCATCAAGCATATGAAGCGCGAAGCACTTACGCGTGATATTCCGGTGATG
ATGCTGACAGCGCGTGGCGAAGAAGAAGACCGCGTACGCGGGCTTGAAGTGGGGGCGGATGATTACATTACCAAACCGTT
TTCACCCAAAGAGCTGGTGGCGCGTATCAAAGCCGTTATGCGCCGTATTTCACCGATGGCGGTGGAAGAAGTGATTGAAA
TGCGCGGCCTAAGCCTTGACCCTTCCTCTCATCGCGTGACGACCGAAGAGCACGCGTTGGATATGGGGCCGACGGAATTT
AAACTGCTGCATTTCTTTATGACGCATCCTGAACGTGTTTATAGCCGGGAACAGTTGCTGAATCACGTGTGGGGCACTAA
CGTTTATGTTGAAGATCGTACTGTCGACGTCCATATTCGTCGCCTGCGTAAAGCGCTGGAAACCAGCGGACATGACAAAA
TGGTGCAAACCGTTCGGGGAACGGGCTACCGTTTTTCAACGCGTTACTGA

Protein sequence : 
MAKRILVVEDEAPIREMVCFVLEQNGYQPVEAEDYDSAVTQLSEPFPELVLLDWMLPGGSGLQFIKHMKREALTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMRGLSLDPSSHRVTTEEHALDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALETSGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-35 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_049216.1 phosphate regulon response regulator HE999704.1.gene2815. Protein 2e-39 42
phoB YP_049216.1 phosphate regulon response regulator NC_011595.7057856.p0 Protein 9e-35 41
phoB YP_049216.1 phosphate regulon response regulator NC_010400.5986590.p0 Protein 1e-36 41
phoB YP_049216.1 phosphate regulon response regulator NC_010410.6002989.p0 Protein 9e-35 41
phoB YP_049216.1 phosphate regulon response regulator BAC0596 Protein 1e-34 41
phoB YP_049216.1 phosphate regulon response regulator CP001138.1.gene2239. Protein 1e-34 41
phoB YP_049216.1 phosphate regulon response regulator CP000647.1.gene2531. Protein 6e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_049216.1 phosphate regulon response regulator VFG1563 Protein 4e-35 41
phoB YP_049216.1 phosphate regulon response regulator VFG1702 Protein 3e-35 41