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Name : rdgC (ECA1106) Accession : YP_049212.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : recombination associated protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2974 EC number : - Position : 1253391 - 1254320 bp Length : 930 bp Strand : - Note : Required for efficient pilin antigenic variation DNA sequence : ATGTTGTGGTTTAAAAACTTAATGATTTACCGCCTAAGCCAGGATAGCGTGCTGTCCAAAGATAACGTTTTGTCTACGGA TGAAATGGAAAAACGGCTCAGCGCCTTCGCATTCACCCCGTGCGGCAGTCAGGATATGATGAAAACGGGTTGGGTATCGC CGATGGGATCGCACAGCGATGCATTAACGCACGTCGTTAATGGGCAAATCGTTATCTGCGTTCGCAAAGAAGAAAAAATT CTGCCGTCTCCAGTCATCAAACAAACCCTTCAGGCCAAAATTGAACGTCTGGAAGCAGAACAGCACCGTAAGCTGAAAAA AACCGAAAAAGATTCGCTGAAAGACGAAGTGCTGCACAGCCTGTTGCCTCGAGCATTCAGCCGTTTAAGTCAAGTCTGGC TGTGGATCGATACGGTTAACGGCCTGATTATGGTCGATGCCGCCAGTGCCAAAAAAGCGGAAGATACGCTGGCGCTACTG CGAAAAACGCTGGGCTCTCTGCCTGTTGTACCGCTGACAATGGAAAACCCCATCGAGCTGACGCTGACCGAGTGGGTGCG TTCCGGTGAGCCAGCGGCTGGTTTCGCGCTACAAGATGAAGCAGAGCTGAAAGCTATTCTGGAAGACGGTGGCGTTATCC GCTGTAAAAAACAGGATTTGGTCTGCGATGAAATTGCCGTGCATATTGAAGCGGGCAAGCTGGTCACCAAGCTGGCGCTG GACTGGCAGGAACGCATTCAACTGATCTTGTCTGATGACGGCTCGGTAAAACGATTGAAGTTCTCAGATACGCTGCGGGA ACAGAATGACGATATCGATCGGGAAGATTTTGCTCAGCGGTTTGATGCCGATTTCATTTTGATGACCAGCGAGCTGGCTG CATTGATTGCGAATCTGATTGAAGCGTTGGGCGGCGAAGCCCAACGTTAA Protein sequence : MLWFKNLMIYRLSQDSVLSKDNVLSTDEMEKRLSAFAFTPCGSQDMMKTGWVSPMGSHSDALTHVVNGQIVICVRKEEKI LPSPVIKQTLQAKIERLEAEQHRKLKKTEKDSLKDEVLHSLLPRAFSRLSQVWLWIDTVNGLIMVDAASAKKAEDTLALL RKTLGSLPVVPLTMENPIELTLTEWVRSGEPAAGFALQDEAELKAILEDGGVIRCKKQDLVCDEIAVHIEAGKLVTKLAL DWQERIQLILSDDGSVKRLKFSDTLREQNDDIDREDFAQRFDADFILMTSELAALIANLIEALGGEAQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_00998 | YP_001437103.1 | hypothetical protein | Not tested | Not named | Protein | 2e-91 | 64 |
