Gene Information

Name : fliI (bbp071)
Accession : NP_777702.1
Strain : Buchnera aphidicola Bp (Baizongia pistaciae)
Genome accession: NC_004545
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 79027 - 80391 bp
Length : 1365 bp
Strand : +
Note : COG1157

DNA sequence :
ATGAATTTACGTATAAAAAAGTGGTTGGAAAAATTAGATCAATTTGAGAAAATATTAGTGCATATGCCCAGTATAATGTA
TTGTGGTAAATTAATTGGAATTAATGGTTTGGTATTAGAAGTAAGCGGATTGAAATTACCAATTGGTACAATATGCATTG
TTGAAAAAAATAATAGTATTTTAGATTCTGATATGATAGAAGCTGAAGTGATTGGTTTTAGACGAAATTTGTTGTTATTA
CTTCTTTTATCAAATGTTAGCGATTTAACTGCTGATTCTAAAGTTACGCCAAAAATTTTAAATGGTAGCTATTATAATAT
TAATAAACTACCAGTGTGTGATAAATTATTAGGAAGGATCGTAGATGGTTTAGGAAAACCATTAGATAATTTTTCCAAAA
TTGATAGTAAATATAATGTTTCATTAACTAATGTATCAATTAATCCTCTTCATCGTGAGCCCGTAACTCATGTTTTAGAT
ACTGGTATACGATCTATAAATGGATTATTAACGATTGGAAGAGGACAAAAAATAGGTTTGTTTGCTAGTTCTGGATTAGG
AAAAAGTGTTTTGCTAGGTATGATGACACGGTACACTCAGGCAGATATAGTTATATTAAGTTTAATAGGTGAGCGTGGAA
GAGAAGTAAAAGAGTTTATAGATTCTGTGTTAACTGAAACTGTTTTATCTCGTTCAATAGTTATTTCTGCACCTTCAGAA
TCATCAGTGTTGATGCAAACTAGAGGTGCTATTTATGCTATGCGAATAGCTGAATATTTTAGAGATAAAAATTTTCATGT
TTTGTTAATTATGGATTCATTAACTCGTTATGCGATGGCACATCGGGAAATATCTTTATCAATAGGTGAGTTACCTGTTA
GTAAGGGGTACCCGCCTTCTGTTTTTTCAAAATTGTTTTCATTGATAGAGCGTGCGGGAAATGGAAAAATAAATAGTGGA
TCGATTACTGCTTTTTTTACAGTTTTAACTGAAGAAGAGGAAAGATATGATCCCATTTCTGAATCTGCAAGATCAATTTT
AGATGGGCATATTATACTTTCTCGTGAGTATGCGGAATCAGGTCATTATCCTGCTATTAATATAGAAAATTCAATTAGTC
GCGTTATGCCGAATATTGTAGATAGTTCTCATTATTCTTTTGCTTGTCATTTTAAAAAAATTGTATCGTTATATCAGCGC
AATAGAGACTTAATTAATGTTGGTGCATATATTTCAGGAACTGACCCGGATTTGGATATGGCTATTACTTTAATACCTAA
ATTAAACAAGTTTTTACAACAAGGAATGTTAGAGAAAAGTAACTTTTTAGATTCTAAAAAAAGTTTATATAGTTTATTTA
ATTAA

Protein sequence :
MNLRIKKWLEKLDQFEKILVHMPSIMYCGKLIGINGLVLEVSGLKLPIGTICIVEKNNSILDSDMIEAEVIGFRRNLLLL
LLLSNVSDLTADSKVTPKILNGSYYNINKLPVCDKLLGRIVDGLGKPLDNFSKIDSKYNVSLTNVSINPLHREPVTHVLD
TGIRSINGLLTIGRGQKIGLFASSGLGKSVLLGMMTRYTQADIVILSLIGERGREVKEFIDSVLTETVLSRSIVISAPSE
SSVLMQTRGAIYAMRIAEYFRDKNFHVLLIMDSLTRYAMAHREISLSIGELPVSKGYPPSVFSKLFSLIERAGNGKINSG
SITAFFTVLTEEEERYDPISESARSILDGHIILSREYAESGHYPAINIENSISRVMPNIVDSSHYSFACHFKKIVSLYQR
NRDLINVGAYISGTDPDLDMAITLIPKLNKFLQQGMLEKSNFLDSKKSLYSLFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-67 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-67 47
escN AAC31513.1 L0034 Virulence LEE Protein 2e-67 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-67 47
escN AAC38383.1 EscN Virulence LEE Protein 6e-67 46
escN AAK26715.1 EscN Virulence LEE Protein 6e-67 46
escN AAL57542.1 EscN Virulence LEE Protein 6e-67 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-67 46
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-67 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-67 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-67 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-67 46
unnamed AAL06369.1 EscN Virulence LEE Protein 6e-66 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-64 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-64 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-65 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-65 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-65 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-65 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-65 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-79 43
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-79 43
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-78 43
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-78 43
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 43
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-77 42
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-77 42
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-77 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-77 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI NP_777702.1 flagellum-specific ATP synthase VFG2331 Protein 3e-117 54
fliI NP_777702.1 flagellum-specific ATP synthase VFG2499 Protein 1e-114 52
fliI NP_777702.1 flagellum-specific ATP synthase VFG1254 Protein 1e-106 49
fliI NP_777702.1 flagellum-specific ATP synthase VFG0812 Protein 1e-67 47
fliI NP_777702.1 flagellum-specific ATP synthase VFG0730 Protein 3e-67 46
fliI NP_777702.1 flagellum-specific ATP synthase VFG0515 Protein 1e-65 45