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Name : serS (bbp290) Accession : NP_777910.1 Strain : Buchnera aphidicola Bp (Baizongia pistaciae) Genome accession: NC_004545 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 339256 - 340554 bp Length : 1299 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAAATCCTAATTTGTTACGCAACCATATAGAGTTTGTTTTTAAAAACTTAGCTAGACGCGGGTTTTCGTTAGATGT AAAACAATTTACTGAAATGGAAAAAAAACGAAAAATTTTACAAACTAAAGTAGAAGAGCTTCAATCAAGACATAACACTT TATCTAAACATATTGGAAGAATAAAACTTATACATCCAAATATTCAATGTATGAAAGAAAGAATAATAACATTAAAAAAA AAAATAGACGTTATGAAAAAAGAACTCAAAATTTTATTAGAACAAATTCATATTTTTTTAATGAATATTCCTAATCTTCC AGATATTAACATTCCTGATGGAATGGGTTCAGATGATAATCAAGAAGTTAGTCGTTGGGGAATTATAAAAAATTATAATT TTAAAATTAAAAACCATGTTGAATTAGGAAATCATCTCAATGGTTTTGATTGGAAATCTGCAGCTAATATTTCTGGATCT AGATTTTTCATTATGAAAGGAAAAATAGCTCTTTTATATCGAGTTTTAGGACAATTTATGTTAGATTTGCATACTAATGA ACATGGATATCTAGAAACATATGTTCCATGTTTAGTTAAAACAAATAATTTATATGGTACAGGTCAATTACCTAGATTTA AAACGGATTTATTTTACGCTAAATCACTTTTAGATGAATCACAAAATAATAATAATTTTGCATTAATACCGACTGCTGAA GTTCCGTTAACTAATTTGTTTCGTGATTGTATATTAGATGAACAACAATTACCAATTATGTTAGTTGCTAAAACACCTTG CTTTCGTTCAGAAGCTCTGTCTTACGGACGAGATACACAAGGTTTAATTCGTACGCATCAATTTGATAAAGTAGAGATTG TTCAGATTGTACATCCAAGTGATTCTATGCAGAAATTGGAAGAATTAACAATACATGCTGAAAGAGTTTTGAAATTATTA AAATTACCATATCGAAAAACGTTATTATGTACACGAGATATAGGATTTTCGTCTTCTAAAACCTATGATTTAGAAGTGTG GTTTCCTTCTCAAAATGTTTATCGAGAAGTATCTTCTTGTTCCAACATGTTAGATTTTCAAGCTCGAAGAATAAAAGCAA GATTTCATTGTAACGCACAAAATAAAAAAATTTTTATACATACTATTAATGGATCTGGATTAGCTGTTGGAAGAACTTTA GCAGCAATTTTAGAAAATTATCAGCAAAAAGACGGGAGAATTAAAATACCTAAAATATTAAGAAATAACTACATGAATGG ATTAGAATTTTTAGAATAG Protein sequence : MLNPNLLRNHIEFVFKNLARRGFSLDVKQFTEMEKKRKILQTKVEELQSRHNTLSKHIGRIKLIHPNIQCMKERIITLKK KIDVMKKELKILLEQIHIFLMNIPNLPDINIPDGMGSDDNQEVSRWGIIKNYNFKIKNHVELGNHLNGFDWKSAANISGS RFFIMKGKIALLYRVLGQFMLDLHTNEHGYLETYVPCLVKTNNLYGTGQLPRFKTDLFYAKSLLDESQNNNNFALIPTAE VPLTNLFRDCILDEQQLPIMLVAKTPCFRSEALSYGRDTQGLIRTHQFDKVEIVQIVHPSDSMQKLEELTIHAERVLKLL KLPYRKTLLCTRDIGFSSSKTYDLEVWFPSQNVYREVSSCSNMLDFQARRIKARFHCNAQNKKIFIHTINGSGLAVGRTL AAILENYQQKDGRIKIPKILRNNYMNGLEFLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-87 | 46 |
