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Name : thiC (blr6659) Accession : NP_773299.1 Strain : Bradyrhizobium japonicum USDA 110 Genome accession: NC_004463 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 7333765 - 7335663 bp Length : 1899 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACATCCGCTCCAACCCGCAACAGACCGTTCCCGCCGTCACCACCGGCCCGCTGTCGTCTTCACGAAAGATCTTCGC GTCCCCGGACGCCGCGCCCGACCTGCGCGTGCCCCTGCGCGAGATCATCCTGTCCGAAGGCGCTGGCGAGCCGAACCTGC CGGTGTACGACACCTCCGGCCCCTACACCGATCCGTCCGTGACCATCGACGTCAACGCCGGCCTTGCCCGGAGCCGCAAG CAATGGGTGCTGGAGCGCGGCGGCGTCGAGGAATATGAGGGCCGCCAGGTCAAGCCGGAGGACAATGGCAACCTCTCCAC CGACAAGGCCGCGCGCGCGTTCTCGGCCTATCACAAGCCGCTGCGCGGCCTCGACGGCCACAAGATCACGCAGCTCGAAT TCGCCCGCGCCGGCATCATCACCAAGGAGATGATCTACGTCGCCGCCCGCGAAAACCTTGGCCGCAAGGAGCAGCTCGAG CGCGCGGAAGCAGCGCTCGCCGACGGCGAAAGCTTCGGCGCGGAAGTCCCCGCCTTCATCACCCCGGAGTTCGTGCGCTC CGAGATCGCGCGCGGCCGCGCCATCATCCCCTGCAACATCAACCACTCAGAGCTCGAGCCGATGATCATCGGCCGCAACT TCCTCACCAAGATCAACGCCAATATCGGCAACTCGGCGGTGACCTCATCCGTCGAGGAAGAGGTCGAGAAGATGGTGTGG GCGATCCGCTGGGGCGCCGACACCGTGATGGACCTCTCGACGGGCCGCAACATCCACACCACCCGCGAATGGATCTTGCG CAACGCGCCGGTGCCGATCGGCACCGTTCCCATTTACCAGGCGCTGGAGAAGTGCAACGGCGATCCGGTCAAGCTGACCT GGGAGCTCTACAAGGACACGCTGATCGAGCAGTGCGAGCAGGGCGTCGACTATTTCACCATCCACGCCGGCGTGCGCCTG TCCTACATCCACCTCACCGCCAACCGCGTCACCGGCATCGTCTCTAGAGGCGGCTCGATCATGGCGAAGTGGTGCCTGGC GCATCACAAGGAGAGCTTCCTCTACACCCATTTCGACGAGATCTGCGACCTCATGCGCAAGTATGATGTCTCGTTCTCGC TCGGCGACGGCCTGCGTCCCGGCTCGATCGCGGACGCCAACGACCGTGCGCAGTTTGCCGAACTGGAAACGCTCGGCGAG CTGACCAAGATCGCGTGGGACAAGGGCTGCCAGGTCATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT CAACATGGACAAGCAGCTTAGGGAGTGCGGCGAAGCGCCGTTCTACACCCTCGGGCCCCTGACCACCGACATCGCGCCGG GCTACGACCACATCACCTCGGGGATTGGCGCCGCCATGATCGGCTGGTTCGGCTGCGCCATGCTCTGCTACGTCACCCCG AAGGAGCATCTTGGGCTACCCGACCGCAACGACGTCAAGGTCGGCGTCATCACCTACAAGATCGCCGCCCACGCCAGCGA TCTCGCCAAGGGCCACCCGGCCGCCCAGCTGCGCGACGACGCGCTGTCCCGCGCCCGTTTCGACTTCCGCTGGAGCGACC AGTTCAACCTCGGCCTCGACCCCGACACCGCGAAAAACTTCCACGACGAGACCCTGCCGAAGGAAGCCCACAAGGTCGCC CATTTCTGCTCGATGTGCGGCCCAAAATTCTGCTCGATGAAGATCACGCAGGACGTGCGCGACTATGCGGCGACGCTGAA CGATCCGAACTCGATCGGCATGTCGCTGAGCGGGACCGCCGAGGACGGCATGAAGCAGATGAGCGCGAAGTTCAAGGAGA TGGGCAGCAGCGTGTATCTGGATGCGGAGAAGGTGAAGGAGAGTAATCGGGTGTTGTGA Protein sequence : MNIRSNPQQTVPAVTTGPLSSSRKIFASPDAAPDLRVPLREIILSEGAGEPNLPVYDTSGPYTDPSVTIDVNAGLARSRK QWVLERGGVEEYEGRQVKPEDNGNLSTDKAARAFSAYHKPLRGLDGHKITQLEFARAGIITKEMIYVAARENLGRKEQLE RAEAALADGESFGAEVPAFITPEFVRSEIARGRAIIPCNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVW AIRWGADTVMDLSTGRNIHTTREWILRNAPVPIGTVPIYQALEKCNGDPVKLTWELYKDTLIEQCEQGVDYFTIHAGVRL SYIHLTANRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE LTKIAWDKGCQVMIEGPGHVPMHKIKINMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP KEHLGLPDRNDVKVGVITYKIAAHASDLAKGHPAAQLRDDALSRARFDFRWSDQFNLGLDPDTAKNFHDETLPKEAHKVA HFCSMCGPKFCSMKITQDVRDYAATLNDPNSIGMSLSGTAEDGMKQMSAKFKEMGSSVYLDAEKVKESNRVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 66 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 66 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 64 |
