|
Name : betB (blr3776) Accession : NP_770416.1 Strain : Bradyrhizobium japonicum USDA 110 Genome accession: NC_004463 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 4185837 - 4187324 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGATGTCAGTTGCATATGACTTTGCGCATTCGCCAGCCAGCGAGTTCATGGCCCGGCCGCAGCATCTGCTCATCGACGG CCGCCGCGTCCCCGCGAGCTCCGGCCGCACCTTCAAATCGCTCAATCCGGCGACCGGGCAGGTCATCGCCACGGTCGCCG AAGGCAACGAGGCCGATGTCGACCATGCGGTAGCGGCCGCGCGCCGGGCGTTCGAGGGCCCGTGGCGCACGATGCGCGCC TCCGAGCGCGGCCAGATCCTGCTGCGCTGGGCCGAGCTGCTCAAGGCAAACGCCGAAGAAATCATCGAGCTCGAGTCGAT CGATGCCGGCAAGCCGATCTCCGCGACGCTGCGCCAGGACTTCCCGGCTGCCGTCGACACGCTGATCTACTACGCCGGCT GGGCCGACAAGATCAGCGGCGACGTCGTGCCGGTGCGTGACGATGCCCTGACCTACACCGTGCGCGAGCCGGTCGGCGTG GTCGCGGCCATCGTGCCGTGGAATTTCCCGCTGATGATCGGGATGTGGAAGCTGGCGCCGGCGCTGGCCTGCGGCTGCAC GATCGTGATGAAGCCGGCCGAGCTGACCTCGCTGTCGGCGCTGCGCATCGCCGAACTCGCGCTTCAGGCCGGCCTGCCGG CAGGCGTCTTCAACGTCGTCACGGGCCCCGGCCGCGTCGTCGGCGACGCGCTGGTCAATCACCCTGACGTCGACAAGGTC ACCTTCACCGGTTCGCCGGGCGTGGGTCGTGGAATCATGAAAGGCGCGGCCGGCAATTTCAAGCGCGTCTCGCTCGAGCT CGGCGGCAAATCGGCCAATGTCATCTTCGACGATGCCGATCTCGAAGCAGCCTCGAAAGCCGCGGCCTCCGGCATCTTCT TCAACGCCGGCCAGGTGTGCTCGGCCGGCTCCCGCGTGCTAGTGCAGGAGAAGGCCTATGACGAAGTCGTCGAGCGTCTC GCTGCACGCGCAAAATCGCTGAAGATCGGCGATCCGCTCGACCGCAAGACCGCGCTCGGGCCTGTCATCTCCGAGAAGCA GATGAAGTCGATCCTCGACTATGTCGATATCGGCCAGAAGGAGGGGGCGAGCCTTGTCACCGGCGGGACGCGGGTCGGCG AGCGCGGCTACTTCATCAGCCCCGCGGTGTTCGCGAATGTCGAACACGAGATGCGGATCTCGCAGGAGGAAATCTTCGGT CCCGTCGTCAGCATCATCAAGTTCAGGGATGAGGCCGATGCCTTGCGGATCGCCAACGGCACCGCCTACAGCCTCGCCGC CGGCGTCTGGAGCCGCGACATCGGCAAGCTCCAGCGTTTTGCCAAGCGGGCGCGCGCAGGCACGGTCTGGATGAACACCT ATGGCTATACCGACGTGCGCCTGCCCTGGGGCGGCGAACGCGACTCCGGCCTCGGTCGCGAGCACGGTACCGCCGCGCTC GACAATTTCACCGAGCCGAAGGCGGTGTGGATGAACTTAGCCGTCTGA Protein sequence : MMSVAYDFAHSPASEFMARPQHLLIDGRRVPASSGRTFKSLNPATGQVIATVAEGNEADVDHAVAAARRAFEGPWRTMRA SERGQILLRWAELLKANAEEIIELESIDAGKPISATLRQDFPAAVDTLIYYAGWADKISGDVVPVRDDALTYTVREPVGV VAAIVPWNFPLMIGMWKLAPALACGCTIVMKPAELTSLSALRIAELALQAGLPAGVFNVVTGPGRVVGDALVNHPDVDKV TFTGSPGVGRGIMKGAAGNFKRVSLELGGKSANVIFDDADLEAASKAAASGIFFNAGQVCSAGSRVLVQEKAYDEVVERL AARAKSLKIGDPLDRKTALGPVISEKQMKSILDYVDIGQKEGASLVTGGTRVGERGYFISPAVFANVEHEMRISQEEIFG PVVSIIKFRDEADALRIANGTAYSLAAGVWSRDIGKLQRFAKRARAGTVWMNTYGYTDVRLPWGGERDSGLGREHGTAAL DNFTEPKAVWMNLAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 8e-79 | 44 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-82 | 43 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-79 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 6e-80 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 6e-80 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 6e-80 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-79 | 42 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-67 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| betB | NP_770416.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 2e-79 | 42 |
