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Name : clpB (bll3587) Accession : NP_770227.1 Strain : Bradyrhizobium japonicum USDA 110 Genome accession: NC_004463 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3962178 - 3964817 bp Length : 2640 bp Strand : - Note : - DNA sequence : GTGACCGACATCAGCATTGAAGCTGTAACGGGCAAGCTGAACCGGGCCGGCTATGATGCCTTCTTACAGGCCCTGCGCCA CGCAAAGAGCGCCGGCAATCGCAACGTCGAGCTTGCGCACTGGCTGTTTCATATCCTGCAGCAGGAACGCAACGATCTCA GCCTCTCGGTCGATCATTACAAGCTCGACCGCGCACGCTTGTTGTCGGACCTTGCCGGCGTGATCAATGGCTTTCGTAAG AACGAAACCGACATGCCGGGCGTCGCCAATTCGGTCATCGATCTGCTCGATCGGGGCTGGCATTATGCCACGCTCTTCTT TGGCGAGACCCAGATCCGCACCGGTCATCTGCTTGTGGCAGGCCTGAAATCGAACGATATTCGTCGCACGCTGAACAACC TCTCGCAGGAATTTTCCAAGGTCAACGTCGACGCACTGGCCGCGGAGCGTCGCGCCGTCTGGGCCGGCTCCGACGAGGAG ACCATGCGACCGATGGACGGTTCGGGCCTGGTCGGCGCCGTCACGGAAGGCGCGGCCCAAGCGGGTCCAAAGGGGACGAC GCCGCTCGACCGGTTCTCCCAGGATCTCACCGCCAAGGCCAAATCGGGCGAGATGGATCCGATCCTTGGTCGGGACGAAG AAATCCGCCAACTGATCGACGTGTTGATGCGTCGGCGGCAGAACAATCCAATCCTCACCGGCGAGGCTGGCGTCGGCAAG ACCGCAGTTGTCGAGGGCTTCGCCCAGCGTATCGCCGCCGGCGACGTGCCGCCACCGCTCCGCGGTGTAAGGCTTTGTGC GCTCGACATCGGCCTGATGCAGGCCGGTGCCTCCATGAAGGGCGAGTTTGAGCAGCGCTTGCGGTCGGTGATCGACGAGG TCCAGAGCTCACCCACCCCCATCATCCTGTTCATCGATGAAGCCCACACACTGATCGGCGCCGGCGGCGCGGCCGGCACC GGTGATGCAGCCAATCTCCTGAAACCTCCCCTTGCGCGTGGCACGCTGCGCACGATCGCCGCCACCACGTGGGCAGAATA TCGCCAGTATATCGAGAAAGATCCCGCGCTCACACGACGCTTCCAGCCGATCCAGATCGATGAACCCGATGTGGAAACCT GCTGCATCATGCTGCGCGGACTCCTCGGTCCGATGGAAAAGCACCACGGCGTTCGCATCTCGGATGCCGCGATCGTCGCA GCGGTCAACCTGTCCCACCGCTACATTCCTTCACGGCAGTTACCCGACAAGGCGGTCAGCCTGCTTGATACCGCCTCGGC GCGCGTGGCGATCAGCCAGAGCGCGACTCCGGCCCTGATCGAGGATGCACGCGTTGCGATTGCCGCCCGTGAAGCTGAGC GATCAGCACTCGTCAGCGACAGCGATCTTGGGATTGAGGACGACGAGCGCATCGTAGCGATCGACAACGACGTCGCAGCA TTGAAGGACAAGCTGACGAACCTCGAAGCCGATTGGGCCGCAGAGCAGGAGCTCGTCAAGGACATCCGGGGCATTCGGGA GATCCTGTCCGAACCCATGGAAGGCGACGATCCGGCTGCCAGGCGCGCGGAGCTGCGCGGCAAGTTCGACACGCTTGAGA GCATCAATCCGGAAAAGCGGATGGTCTATGCCTATGTGGACCAGCAGTCGGTGGCGTCCGTTGTCTCTGACTGGACTGGC ATCCCGGTCGGCCGGATGATGCGCGACGAGATCGAAACCGTGCTGAAACTACCGGAGATCCTCAACCGCCGCGTCGTCGG CCAGTCTCATGGGCTGACGATGATCGCCAAGCGAATCGAGACCAGCCGCGCCAAACTGGACAACCCGTCGAAGCCGATCG GCGTGTTCATGCTGGCTGGTCCATCCGGCGTGGGCAAGACCGAAACCGCCCTGGCGCTTGCCGAGACCCTCTACGGCGGC GAGCAGAACATGATCACGATCAACATGTCGGAGTTCCAGGAAGCGCACACCGTCTCGACCTTGAAGGGAGCGCCTCCCGG CTATGTCGGCTATGGAGAAGGTGGACGCCTCACCGAGGCTGTCCGGCGCAAGCCCTATAGCGTCATCCTGCTCGACGAGG TCGAGAAAGCTCATCCCGACGTCCATGAGATCTTCTTCCAGGTGTTCGACAAGGGAACCATGGAGGACGGCAACGGGCGG CGGATCGACTTCAAGAACACGTTGATCATCCTGACCACCAACGTCGGCACCGATCTGATCATGGGCCTCTCGCGAGATCC AAAGTATCGCAGCGAACCGGAAGAGCTCGCCAAGATGCTGAGGCCGGAATTGCTGAAGGTGTTTCCGGCAGCGCTGCTCG GACGCATCGTCTCGATACCGTACTTCCCGCTATCCGACGAAATGCTCGCCGGGATCGCTCGGTTGCAGCTCGACCGGATC GGACGACGCCTCCGTGACAACCATAACGCGGCATTCAGCTACGATGACGCGGTCGTGGAGCACATTGTGTCACGTTGCAA CGACCCGGACTCTGGCGGGCGAATGATTGACAACATCATCACCAACACCCTGCTCCCGGAGCTGTCACGCGAATTCCTCA GCAAGTCGCTTGCCAAGGAAGAAGTCAAGCAAGCGCGGGTCTCGATCGAGAACGACAAGTTCGCATATTCGTGGAATTGA Protein sequence : MTDISIEAVTGKLNRAGYDAFLQALRHAKSAGNRNVELAHWLFHILQQERNDLSLSVDHYKLDRARLLSDLAGVINGFRK NETDMPGVANSVIDLLDRGWHYATLFFGETQIRTGHLLVAGLKSNDIRRTLNNLSQEFSKVNVDALAAERRAVWAGSDEE TMRPMDGSGLVGAVTEGAAQAGPKGTTPLDRFSQDLTAKAKSGEMDPILGRDEEIRQLIDVLMRRRQNNPILTGEAGVGK TAVVEGFAQRIAAGDVPPPLRGVRLCALDIGLMQAGASMKGEFEQRLRSVIDEVQSSPTPIILFIDEAHTLIGAGGAAGT GDAANLLKPPLARGTLRTIAATTWAEYRQYIEKDPALTRRFQPIQIDEPDVETCCIMLRGLLGPMEKHHGVRISDAAIVA AVNLSHRYIPSRQLPDKAVSLLDTASARVAISQSATPALIEDARVAIAAREAERSALVSDSDLGIEDDERIVAIDNDVAA LKDKLTNLEADWAAEQELVKDIRGIREILSEPMEGDDPAARRAELRGKFDTLESINPEKRMVYAYVDQQSVASVVSDWTG IPVGRMMRDEIETVLKLPEILNRRVVGQSHGLTMIAKRIETSRAKLDNPSKPIGVFMLAGPSGVGKTETALALAETLYGG EQNMITINMSEFQEAHTVSTLKGAPPGYVGYGEGGRLTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGTMEDGNGR RIDFKNTLIILTTNVGTDLIMGLSRDPKYRSEPEELAKMLRPELLKVFPAALLGRIVSIPYFPLSDEMLAGIARLQLDRI GRRLRDNHNAAFSYDDAVVEHIVSRCNDPDSGGRMIDNIITNTLLPELSREFLSKSLAKEEVKQARVSIENDKFAYSWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_770227.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2076 | Protein | 0.0 | 58 |
| clpB | NP_770227.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 3e-143 | 43 |
