Gene Information

Name : blr2052 (blr2052)
Accession : NP_768692.1
Strain : Bradyrhizobium japonicum USDA 110
Genome accession: NC_004463
Putative virulence/resistance : Virulence
Product : maturase; reverse transcriptase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 2213052 - 2214296 bp
Length : 1245 bp
Strand : +
Note : blr2052; probable maturase; reverse transcriptase

DNA sequence :
GTGAAGTCCGGCAAACCGTTGCCCATCACCAAGCGGATGGTGTGGGAAGCCTATAAGCTTGTGAAGAAGGGAAAGGCGGC
GGGCGTCGATGGCCAGAGTCTCGAAGACTTTGCCGGCGATCTTGAGAACCACCGCTACCGGCTGTGGAATCGGTTGGTGT
CAGGAAGTTACTTCCCGCCACCAGTGCGGCGGGTCGAGATTCCTAAGGCCGGCGGTGGGATTCGTCCTCTTGGCATACCG
ACGGTCGCGGACCGTATCGCCCAGATGGTGGTCAAACGGTGTCTGGAGCCGGTGTTGGATGGAGAATTTGATCCGGACTC
CTACGGCTACAGGCCCGGAAAATCGGCCCATCAGGCCATAGAGCAGGCGCGTAAGCGGTGCTGGCAGCACGACTGGGTCG
TAGATCTCGACAACAAGAGCTTTTTCGACACGATCGATCATGAACTCTTGATGCGCGCGGTCTATCGACACACGAAAGCT
GACTGGATCCGGCTCTACATTGAGCGGTGGCTTAAGGCTCCGGTCGAGATGCCCGATGGATCGGTTCGGGCGAGGACGAC
AGGCAGGTCTCAAGGGGGTGTGGTCAGTCCAATCCTGGCAAACTTGTTCCTGCACTACGTGTTCGATGTTTGGATGAAGG
GGTCTTATCCCCACATTCCGTTCGAACGCTACGCCGACGACATCATCTGCCATTGCCGCACGCGGCAGGAAGCGGAGGAA
CTCAAATCGGCGCTGGAACGACGGTTTGCTGACTGCCATTTATTGCTGCATCCGGAGAAGACTAAAGTGGTCTACTGCGC
TGACAGCAATCGACGGCGGTCCTACCCGCAGATCCATTTTGACTTCCTGGGCTTTAGCTTCCGCCCCCGTATGGCGAAGA
ACCGGTGGGGCAGGATCTTCACCTGCTTCCTTCCGGGCGTGAGTCCGAACTCTCTCAAGGAGATGAGGGCTCGCATTCGA
GGATGGCGCTTGCCTCAGCACTCGCCGCTTCCGCTTGAAGACATCGCGCGTAGTCTCAGCCCCGTCCTTCGGGGCTGGGA
TCAATACTACGGGCGATTCTACCCGACGGAACTGCGTAGGCTCTATGAGTACTTCGATGAGCGCCTCGGCGCGTGGCTTC
GGTGCAAGTACAAGCAACTGAAGGGCCATCGGGGACGGTCGTTGCGGAAACTCAACGAGATGGCGAAGCAAAATCCAAAG
CTCTTTGTCCATTGGCAAAAGCTTGGACGGGCTACGGTTGGATAA

Protein sequence :
MKSGKPLPITKRMVWEAYKLVKKGKAAGVDGQSLEDFAGDLENHRYRLWNRLVSGSYFPPPVRRVEIPKAGGGIRPLGIP
TVADRIAQMVVKRCLEPVLDGEFDPDSYGYRPGKSAHQAIEQARKRCWQHDWVVDLDNKSFFDTIDHELLMRAVYRHTKA
DWIRLYIERWLKAPVEMPDGSVRARTTGRSQGGVVSPILANLFLHYVFDVWMKGSYPHIPFERYADDIICHCRTRQEAEE
LKSALERRFADCHLLLHPEKTKVVYCADSNRRRSYPQIHFDFLGFSFRPRMAKNRWGRIFTCFLPGVSPNSLKEMRARIR
GWRLPQHSPLPLEDIARSLSPVLRGWDQYYGRFYPTELRRLYEYFDERLGAWLRCKYKQLKGHRGRSLRKLNEMAKQNPK
LFVHWQKLGRATVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 5e-110 53
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 3e-82 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
blr2052 NP_768692.1 maturase; reverse transcriptase VFG1512 Protein 2e-82 43