Gene Information

Name : SE0085 (SE0085)
Accession : NP_763640.1
Strain : Staphylococcus epidermidis ATCC 12228
Genome accession: NC_004461
Putative virulence/resistance : Resistance
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : -
Position : 85268 - 86911 bp
Length : 1644 bp
Strand : +
Note : component of pyruvate dehydrogenase E3

DNA sequence : 
ATGACTCAAAATTCATATAAAATACCCATTCAAGGCATGACATGCACAGGCTGTGAAGAACATGTAACCGAAGCATTGGA
ACAAGCCGGAGCTAAAGATGTTTCGGCCGATTTCCGACGCGGTGAGGCCATTTTTGAACTCAGCGATGATCAGATCGAAA
AGGCTAAGCAAAATATTTCGGCAGCCGGCTATCAACCCGGAGAGGAAGAAAGCCAGCCCTCTGAAAACAGTGTAGATTTC
AATCGGGATGGCGATTACGATCTTCTGATTATTGGTTCCGGCGGTGCGGCGTTTTCTGCAGCTATCAAGGCCAATGAAAA
CGGGGCGAAAGTGGCCATGGTAGAACGGGGAACCGTCGGGGGGACCTGCGTTAACATCGGTTGTGTACCGTCAAAAACCA
TGCTTCGTGCCGGTGAAATAAACGGTCTCGCCCAAAACAATCCGTTTACCGGACTTCAAACGAGTACCGGTGCTGCGGAC
CTTGCCCAATTGACCGAACAAAAAGATGGATTAGTCAGTCAAATGCGTCAAGAAAAATATATAGACTTGATCGAAGAATA
TGGATTTGATCTCATTCGTGGCGAGGCCTCGTTTATCGACGATAAGACGATACAAGTGAATGGACAAAACATCACGTCTA
AAAGCTTTTTAATCGCAACGGGGGCTTCTCCGGCTGTTCCGGAAATCCCGGGAATGAATGAGGTTGATTATTTAACAAGT
ACATCCGCACTCGAATTAAAAGAGGTTCCACAACGATTGGCAGTGATCGGTTCTGGCTATATCGCAGCGGAATTAGGTCA
AATGTTTCACAACCTCGGAACAGAAGTGACTCTCATGCAAAGAAGCGAGCGTCTGTTTAAAACCTACGATCCTGAAATTT
CCGAAGCCATCGATGAATCCTTAACTGAGCAAGGACTTAACCTGATCACTGGGGTCACTTATCAAAAGGTTGAGCAAAAC
GGTAAGTCGACAAGCATTTATATTGAAGTGAACGGTCAAGAACAAGTCATCGAAGCCGATCAAGTCCTCGTGGCAACAGG
AAGAAAGCCGAACACAGAGACTTTAAACCTTGAATCAGCAGGTGTGAAAACAGGGAAAAAAGGCGAAGTGCTGACCAATG
AATATTTGCAAACGTCGAATAACCGAATATATGCCGCGGGCGATGTGACCCTCGGTCCGCAATTCGTTTATGTTGCAGCT
TATGAAGGCGGGATTGTGGCAAATAATGCGTTGGGTCTAGCGAAACGCAAAATCGATCTTCGCTTTGTTCCCGGCGTAAC
CTTCACCAATCCATCGATCGCCACAGTCGGCTTGACTGAACAACAGGCAAAAGAAAAAGGTTACGATGTCAAAACATCGG
TCCTTCCGTTGGACGCTGTACCGCGGGCCTTAGTCAATCACGAAACAACAGGGGTCTATAAACTTGTAGTCAACGCCCAA
ACCCAGAAATTGATCGGGGCGCACATTGTGAGTGAAAATGCTGGAGATGTGATTTATGCGGCAACGTTAGCGGTTCAATT
TGGATTGACCATTGAAGACCTTACGGATAGCTTTGCGCCTTATTTAACGATGGCTGAAGGATTAAAGCTTGCAGCCTTGA
CGTTTGATAAAGACGTATCGAAATTATCTTGTTGTGCAGGCTAA

Protein sequence : 
MTQNSYKIPIQGMTCTGCEEHVTEALEQAGAKDVSADFRRGEAIFELSDDQIEKAKQNISAAGYQPGEEESQPSENSVDF
NRDGDYDLLIIGSGGAAFSAAIKANENGAKVAMVERGTVGGTCVNIGCVPSKTMLRAGEINGLAQNNPFTGLQTSTGAAD
LAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQVNGQNITSKSFLIATGASPAVPEIPGMNEVDYLTS
TSALELKEVPQRLAVIGSGYIAAELGQMFHNLGTEVTLMQRSERLFKTYDPEISEAIDESLTEQGLNLITGVTYQKVEQN
GKSTSIYIEVNGQEQVIEADQVLVATGRKPNTETLNLESAGVKTGKKGEVLTNEYLQTSNNRIYAAGDVTLGPQFVYVAA
YEGGIVANNALGLAKRKIDLRFVPGVTFTNPSIATVGLTEQQAKEKGYDVKTSVLPLDAVPRALVNHETTGVYKLVVNAQ
TQKLIGAHIVSENAGDVIYAATLAVQFGLTIEDLTDSFAPYLTMAEGLKLAALTFDKDVSKLSCCAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0085 NP_763640.1 dihydrolipoamide dehydrogenase Not tested SCCpbp4 Protein 0.0 100
merA BAB47642.1 mercuric reductase Not tested Type-III SCCmec Protein 0.0 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE0085 NP_763640.1 dihydrolipoamide dehydrogenase BAC0651 Protein 0.0 100
SE0085 NP_763640.1 dihydrolipoamide dehydrogenase BAC0224 Protein 0.0 67