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Name : SE0007 (SE0007) Accession : NP_763562.1 Strain : Staphylococcus epidermidis ATCC 12228 Genome accession: NC_004461 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 11648 - 12934 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGACATTCGTTTATTTAGAAATGAACCTGAGAAAGTGAAGAGCAAAATTGAATTAAGAGGCGACGATCCTAAAGT TGTCGACCAAGTTTTAGAATTAGATGAACAACGCCGTGAATTAATCAGTAAAACTGAAGAGATGAAGGCGAAAAGAAATA AAGTGAGCGAAGAAATAGCTCAAAAGAAACGTAATAAAGAAGACGCTGATGACGTCATTGCTGAGATGCGTCATTTAGGT GATGAAATTAAAGATATCGATAATCAACTTAATGAAGTAGATAATAAAATTAGAGATATCTTAATTCGTATTCCTAACTT AATTAATGAAGATGTACCTCAAGGTGCTTCTGATGAAGAAAACGTTGAAGTTAAAAAATGGGGTACGCCACGTGATTTTG AATTTGAACCTAAAGCGCATTGGGATTTAGTTGAAGAATTAAAAATGGCTGACTTTGAACGTGCTGCTAAAGTATCTGGT GCTCGTTTCGTATACTTAACTAAAGATGGCGCATTACTTGAACGTGCTTTAATGAACTACATGTTGACAAAACATACAAC GCAACATGGTTATACTGAAATGATGACACCTCAATTAGTGAATGCTGATACGATGTTTGGAACAGGTCAATTACCTAAAT TTGAAGAAGATTTATTTAAAGTTGAAAAAGAAGGCTTATATACGATTCCAACTGCAGAAGTACCTTTAACAAACTTCTAT AGAGATGAAATTATTCAACCAGGTGTACTACCTGAATTATTTACAGCTCAAACTGCATGTTTCCGTAGTGAAGCAGGATC AGCTGGTAGAGATACTAGAGGGTTAATTCGTTTACATCAATTTGATAAAGTTGAAATGGTTCGTATTGTACAACCTGAAG ATTCTTGGGATGCTTTAGAAGAAATGACACAAAATGCTGAAGCTATTCTTGAAGAATTAGGTTTACCATACCGTCGTGTT ATCTTATGTACTGGCGATATTGGTTTCAGTGCTAGTAAAACATATGATTTAGAAGTTTGGTTACCAAGTTACAATGATTA TAAAGAAATCAGTTCTTGCTCTAACTGTACTGATTTCCAAGCACGTCGCGCAAATATCAGATTCAAACGTGATGCTGCTT CTAAACCAGAATTAGTACACACATTAAATGGTAGTGGTTTAGCTGTAGGTCGTACATTTGCAGCCATCGTTGAAAACTAT CAAAACGAAGATGGTACATTAACAATTCCTGAAGCATTAGTACCATTTATGGGTGGCAAAACTAAAATTGAAAAACCAAT CAAATAA Protein sequence : MLDIRLFRNEPEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVSEEIAQKKRNKEDADDVIAEMRHLG DEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGASDEENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSG ARFVYLTKDGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNFY RDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPEDSWDALEEMTQNAEAILEELGLPYRRV ILCTGDIGFSASKTYDLEVWLPSYNDYKEISSCSNCTDFQARRANIRFKRDAASKPELVHTLNGSGLAVGRTFAAIVENY QNEDGTLTIPEALVPFMGGKTKIEKPIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-120 | 59 |
