|
Name : nrdF (SE0514) Accession : NP_764069.1 Strain : Staphylococcus epidermidis ATCC 12228 Genome accession: NC_004461 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit beta Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0208 EC number : 1.17.4.1 Position : 507596 - 508564 bp Length : 969 bp Strand : + Note : B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE DNA sequence : ATGAAGGCGGTAAATTGGAACACCCAAGAAGATATGACTAATATGTTCTGGCGTCAAAATATCTCACAAATGTGGGTGGA AACAGAATTTAAAGTATCAAAAGATATAGCAAGTTGGAAAACATTAACAGATTCTGAGAAAAATACTTTTAAAAAAGCGC TTGCAGGTTTAACAGGTTTAGATACACATCAAGCTGATGATGGTATGCCATTAATCATGCTTCATACTACTGATTTAAGA AAGAAAGCTGTTTATTCATTTATGGCTATGATGGAACAAATCCATGCGAAAAGTTATTCTCATATCTTCACTACATTATT ACCATCTAGTGAAACCAACTATTTATTGGATACTTGGGTTATTGAAGAGCCACATTTAAAATATAAATCAGATAAAATTG TAGAAAATTACCACAAACTTTGGGGTAAAGAAGCATCGATTTACGATCAATATATTGCTCGTGTTTCTAGTGTATTCTTA GAAACATTTCTATTCTATTCTGGCTTCTATTATCCATTATATCTCGCAGGACAAGGAAAAATGACTACGTCAGGTGAAAT TATACGTAAGATACTTTTAGATGAATCTATACATGGAGTGTTCACAGGTTTAGATGCACAAAGTCTACGTAATGAGTTAT CTGAAAGTGAGAAACAAAAAGCTGATCAAGAAATGTACAAATTATTAAATGAACTTTATGATAATGAAGTTTCATATACA CATTTATTATATGATGATATTGGTCTTGCTGAAGATGTATTAAATTATGTTCGATATAATGGAAATAAAGCATTATCGAA TTTAGGTTTTGAACCATATTTCGAAGAGAGAGAGTTTAACCCTATTATTGAAAATGCACTAGATACATCTACAAAGAACC ACGATTTCTTCTCTGTTAAAGGTGATGGCTATACATTGGCTTTAAATGTTGAGCCTCTACGTGATGAAGACTTTGTTTTT GATAATTAA Protein sequence : MKAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLTDSEKNTFKKALAGLTGLDTHQADDGMPLIMLHTTDLR KKAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDTWVIEEPHLKYKSDKIVENYHKLWGKEASIYDQYIARVSSVFL ETFLFYSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYT HLLYDDIGLAEDVLNYVRYNGNKALSNLGFEPYFEEREFNPIIENALDTSTKNHDFFSVKGDGYTLALNVEPLRDEDFVF DN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nrdF | YP_189075.1 | ribonucleotide-diphosphate reductase subunit beta | Not tested | ¥ÕSP¥â | Protein | 5e-83 | 55 |
