Gene Information

Name : SE0405 (SE0405)
Accession : NP_763960.1
Strain : Staphylococcus epidermidis ATCC 12228
Genome accession: NC_004461
Putative virulence/resistance : Virulence
Product : lipoprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 399912 - 400841 bp
Length : 930 bp
Strand : -
Note : similar to adhesin PsaA

DNA sequence : 
GTGAAAAAAATTCTCGCTTTAGCAATAGCATTTTTAATTATCCTTGCCGCATGTGGGAATCACAGTAACCATGAACATCA
CTCACATGAAGGAAAATTAAAAGTTGTAACTACAAACTCTATTCTCTATGACATGGTTAAACGTGTCGGTGGAAATAAGG
TCGATGTTCATAGCATCGTTCCAGTAGGACAAGACCCACATGAATATGAGGTTAAACCTAAAGATATTAAAGCATTAACA
GATGCTGACGTTGTATTTTATAACGGTTTAAACCTAGAAACTGGAAATGGTTGGTTTGAAAAAGCACTTGACCAAGCAGG
AAAATCAACAAAAGATAAAAATGTGATAGCAGCATCAAATAATGTTAAACCAATATACTTAAATGGTGAGGAAGGTAACA
AAAACAAACAAGATCCACATGCATGGTTAAGTTTAGAGAATGGAATTAAATACGTAAAAACAATACAAAAATCACTAGAA
CATCATGATAAAAAAGATAAGTCTACATATGAAAAACAAGGGAATGCATATATATCAAAATTAGAAGAACTTAATAAAGA
TAGTAAAAATAAATTTGATGACATACCCAAAAATCAACGTGCCATGATGACAAGTGAAGGTGCATTTAAATATTTTGCTC
AACAATTCGATGTTAAACCAGGTTATATTTGGGAGATAAACACAGAAAAACAAGGTACACCTGGTCAAATGAAACAAGCC
ATTAAATTTGTTAAAGATAATCATTTAAAACATTTATTAGTCGAAACAAGCGTAGATAAAAAAGCTATGCAAAGTTTATC
AGAAGAAACTAAGAAAGATATTTATGGTGAAGTATTTACCGACTCTATAGGTAAGGAAGGTACTAAAGGTGACTCATACT
ATAAAATGATGAAATCTAATATTGATACAATACATGGTAGTATGAAATAA

Protein sequence : 
MKKILALAIAFLIILAACGNHSNHEHHSHEGKLKVVTTNSILYDMVKRVGGNKVDVHSIVPVGQDPHEYEVKPKDIKALT
DADVVFYNGLNLETGNGWFEKALDQAGKSTKDKNVIAASNNVKPIYLNGEEGNKNKQDPHAWLSLENGIKYVKTIQKSLE
HHDKKDKSTYEKQGNAYISKLEELNKDSKNKFDDIPKNQRAMMTSEGAFKYFAQQFDVKPGYIWEINTEKQGTPGQMKQA
IKFVKDNHLKHLLVETSVDKKAMQSLSEETKKDIYGEVFTDSIGKEGTKGDSYYKMMKSNIDTIHGSMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 4e-65 49
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 3e-65 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE0405 NP_763960.1 lipoprotein VFG2157 Protein 5e-71 53
SE0405 NP_763960.1 lipoprotein VFG2165 Protein 2e-69 52
SE0405 NP_763960.1 lipoprotein VFG1359 Protein 3e-69 50