Gene Information

Name : SE2406 (SE2406)
Accession : NP_765961.1
Strain : Staphylococcus epidermidis ATCC 12228
Genome accession: NC_004461
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2487859 - 2488545 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGATTGAATTGAGAAAAATCAATCGACACTTTAAAAATGGAAATGAATCAAATCATATTTTGAAAGACATAGATATTCA
TATTGATGAAGGTGAATTTATTGCTATCATGGGTCCGTCTGGTTCAGGTAAAAGTACGTTAATTAATATCTTGGGATTTA
TTGATCGTGGATATGAAGGAGAATACTTTTTTAACAATGAGAATTATCAAAAAAGCTCAGATAATAAGCTCGCAGAAATT
CGAAATCATACTGTAGGTTTCGTCTTTCAGAATTTTAAATTGATTCAAAATAACACTATTTTAGAAAATGTAAGTATTCC
GCTAATTTATAATGGTTTGAGTAATAAAGCGAGAAAAAGCAAAGTTTTAGACGGACTTCATGACGTCGGTCTCAAAGGTA
AAGAGAATCTCTTACCAAATAAATTGTCAGGAGGGCAGCAACAACGTGTAGCTATTGCCCGGGCAATTATTAATGACCCT
AAGTTTATTATTGCCGATGAACCTACTGGCGCTCTTGATTCGAAGACATCTCAAGATATTATGGAGCTTTTCGTAAAACT
GAACAAAGAACAGAATACAACTATTATTATGGTAACGCATGATCGTGAAGTGGCGGAAAAAGCTGATCGTATTATCCATA
TTTTGGATGGGCGTGTGCAAGAGGAAGAGGTGTTGACACGTGAATAA

Protein sequence :
MIELRKINRHFKNGNESNHILKDIDIHIDEGEFIAIMGPSGSGKSTLINILGFIDRGYEGEYFFNNENYQKSSDNKLAEI
RNHTVGFVFQNFKLIQNNTILENVSIPLIYNGLSNKARKSKVLDGLHDVGLKGKENLLPNKLSGGQQQRVAIARAIINDP
KFIIADEPTGALDSKTSQDIMELFVKLNKEQNTTIIMVTHDREVAEKADRIIHILDGRVQEEEVLTRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-32 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE2406 NP_765961.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-50 49
SE2406 NP_765961.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-39 44
SE2406 NP_765961.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-37 41