Gene Information

Name : SE2400 (SE2400)
Accession : NP_765955.1
Strain : Staphylococcus epidermidis ATCC 12228
Genome accession: NC_004461
Putative virulence/resistance : Resistance
Product : vraD protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2480690 - 2481448 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTATTTTAACAGCAAATCAATTATCAAAAGTATATGGTCACAAACAAAAATATCGAGCTTTAAATAATATAAGTTT
TTCAGTTGAAAAAGGGGAATTTGTAGCTGTCATGGGTCCTTCTGGATCAGGTAAAACGACTTTACTCAATGTGTTAAGTT
CAATAGATACTATTTCAGGAGGAACTGTGGAAGTTGAAGGTAAAGAAATTAATAAACTGAGCCACAAAGAAGTGGCAAAT
TTTCGAAAACAACATCTCGGTTTTATTTTTCAAGATTATAGCGTTTTACCCACATTAACAGTAAAAGAAAATATTATGCT
ACCACTCTCAGTACAAAAATTCCATAAATATGAAATGGAACAAAATTATAAAGAAGTGGCTGAGGCATTAGGTATTTATA
ACCTGGGAAATAAATATCCAAGTGAAATTTCTGGCGGTCAGCAACAACGTACGGCGGCAGCCCGGGCATTCGTCCATAAA
CCAACGATTATTTTCGCAGATGAACCTACTGGCGCATTAGATTCTAAAAGTGCTCAAGATTTGTTACACCGTCTAGAAGA
TATGAATAAACAATTTAATTCAACCATTATGATGGTGACACATGATCCTTCAGCCGCTAGTTACGCTGAGAGAGTAATTA
TGTTGAAAGACGGTGATATACACTCAGAAATCTACCAGAGTAACGATTCAAAACAAACATTTTACCAAGAAATTATGAAA
CTTCAAACCGCATTAGGTGGTGTCAGTCATGACATTTAA

Protein sequence : 
MAILTANQLSKVYGHKQKYRALNNISFSVEKGEFVAVMGPSGSGKTTLLNVLSSIDTISGGTVEVEGKEINKLSHKEVAN
FRKQHLGFIFQDYSVLPTLTVKENIMLPLSVQKFHKYEMEQNYKEVAEALGIYNLGNKYPSEISGGQQQRTAAARAFVHK
PTIIFADEPTGALDSKSAQDLLHRLEDMNKQFNSTIMMVTHDPSAASYAERVIMLKDGDIHSEIYQSNDSKQTFYQEIMK
LQTALGGVSHDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE2400 NP_765955.1 vraD protein NC_012469.1.7686878. Protein 1e-34 44
SE2400 NP_765955.1 vraD protein CP001581.1.gene598.p Protein 1e-36 42