Gene Information

Name : SE2380 (SE2380)
Accession : NP_765935.1
Strain : Staphylococcus epidermidis ATCC 12228
Genome accession: NC_004461
Putative virulence/resistance : Unknown
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2454138 - 2455313 bp
Length : 1176 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTTATCTAAAGAAACAGAAGTAATATTCGATGTGCGTAGAGGTAAAGACTACGACTCAGCTAACCCGCCACTTTA
CGATTCATCTACATTCCATCAAAAAGTGTTAGGCGGTGAGACTCAATATGATTATGCACGAAGTGGTAACCCTAACCGAA
CTTTACTTGAAGAGAAACTTGCACGTTTAGAAGGTGGTAAATATGCATTTGCTTATGCTTCAGGCATTGCTGCAATTTCA
GCCGTTTTACTCACATTAAACGCAGGGGATCATGTTATTTTACCTGATGATGTTTACGGGGGCACATTTAGATTAACTGA
ACAAATACTCAATCGATTCAATATTGAATTTACTACAGTTAACGCTACACATATAGATCATATCACTGAAGCTATTCAAT
CAAACACAAAACTCATCTATGTAGAGACGCCTTCAAATCCACTTTTCAAAATTACAGATATTCATGCTGTAGCAACGCTA
GCAAAGGAACATAAGATACTATTAGCTGTTGATAATACGTTTATGACACCTTTGGGTCAATCACCTTTAGCACTAGGCGC
TGACATAGTTATTCATAGTGCAACTAAATTTCTAGGTGGACATAGCGATTTAATTGCAGGTGCAGCAATTACTAATAATA
GAGAGGTTGCAAATGCATTGTACTTATTACAGAACGGCACGGGCACAGCCCTTTCTGCATATGATAGTTGGGCACTTGCA
AAACATCTTAAAACATTACCAGTTCGTTTTAAACAATCTGTTCATAATGCTGAACGTCTTGTTCAATTTTTGAGTCAAAG
AGAGGAGATTTCTGAGGTGTATTACCCAGGAAATAATCCTACACATCTCAAGCAAGCTTCAACTGGAGGTGCAGTGATAG
GTTTCCGACTTAAAGATGAATCTAAAGCACAAAAGTTCGTCGATTCTCTTACTTTACCACTTGTATCAGTGAGTCTCGGT
GGTGTAGAAACTATCCTATCACATCCCGCAACAATGTCTCATGCAGCAGTGCCAGAAGATGTGAGACGTGAACGTGGCAT
CACTTTCGGGTTATTCCGTTTAAGTGTAGGTCTTGAGAATCCAGAAGAACTCATCGCAGATTTTAACTACGCTTTAAAGG
AGGCTTTCAATGAGTCATTTACTGAACCAATTAAAGAGCAACGTTTTAGTAGCTGA

Protein sequence :
MSLSKETEVIFDVRRGKDYDSANPPLYDSSTFHQKVLGGETQYDYARSGNPNRTLLEEKLARLEGGKYAFAYASGIAAIS
AVLLTLNAGDHVILPDDVYGGTFRLTEQILNRFNIEFTTVNATHIDHITEAIQSNTKLIYVETPSNPLFKITDIHAVATL
AKEHKILLAVDNTFMTPLGQSPLALGADIVIHSATKFLGGHSDLIAGAAITNNREVANALYLLQNGTGTALSAYDSWALA
KHLKTLPVRFKQSVHNAERLVQFLSQREEISEVYYPGNNPTHLKQASTGGAVIGFRLKDESKAQKFVDSLTLPLVSVSLG
GVETILSHPATMSHAAVPEDVRRERGITFGLFRLSVGLENPEELIADFNYALKEAFNESFTEPIKEQRFSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-73 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-70 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-69 43