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Name : SE0216 (SE0216) Accession : NP_763771.1 Strain : Staphylococcus epidermidis ATCC 12228 Genome accession: NC_004461 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 205962 - 207179 bp Length : 1218 bp Strand : - Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGACTGTATTGAGTGAGCAAGACAAAATAAGATTATTAGCTGATATCGTCAAGATTCAAACTGAGAATGATCATGAAAT TGAAGTATGTGAGTACTTAAAAGACCTGTTAAGTCAATATGATATTGATTCTAAGATTGTTAAAGTTAATGATTCACGCG CTAATTTAGTTGCTGAAATTGGTAGTGGCGCTCCAGTCTTAGCAATCAGTGGACACATGGATGTTGTAGATGCTGGTGAC CATGATGATTGGACTTTTCCTCCATTTGAACTCACAGATAAGGATGGCAAGTTATTCGGCAGAGGTACCACTGACATGAA AGGTGGTCTTATGGCGATGGTCATCGCGATGATTGAATTGAAACAATCAAACGCATTAAAGCAAGGTACGATACGTTTAT TAGCTACTACAGGAGAAGAGACGGAACAATATGGTGCACAATTACTTGCTGATGAAGGTTACTTAGATGATGTGAGTGGT TTAATTATTGGCGAACCAACTAGTAATATCGCTTACTATGCTCATAAAGGTTCTATGAGCTGTGTAGTCACAGCGAAAGG TAAGGCTGCACATAGTTCTATGCCACACCTAGGTACAAATGCTGTTGATATTTTAGTTGATTTTGTAAATGAAATGAAAC AAGAATATAAAAATATTAAAGAGCATGATAAAGTACATGAGCTAGACGCTGTTCCAATGATTGAGAAGCATCTCCATAGA AAAATTGGTGAAGAAGAATCACATATCTACTCTGGATTTGTAATGTTAAACTCTGTTTTCAATGGTGGTAAACAAGTTAA TTCTGTTCCTCATAAAGCGACAGCTAAATATAATGTAAGAACTGTTCCAGAGTATGACAGTACTTTCGTGAAGGATTTAT TTGAAAAAGTCATTCGTCATGTGGGTGAAAATTATTTAACTGTAGATATACCTAGCAGTCATGATCCAGTGGCAAGTGAT CGTGATAATCCTCTTATTCAAAATATTACACGTATTGCACCGAATTATGTACATGAAGACATTGTTGTGAGTGCATTGAT TGGTACAACTGATGCATCTAGTTTCCTAGGAACAAATGAAAATAACGTAGATTTTGCTGTCTTTGGACCTGGTGAATCTA TTATGGCGCATCAAGTTGATGAATTTATTAGAAAAGATATGTATTTAAGTTACATTGATGTTTATAAAGATGTATTTAAA GCATATCTAGAAAAATAA Protein sequence : MTVLSEQDKIRLLADIVKIQTENDHEIEVCEYLKDLLSQYDIDSKIVKVNDSRANLVAEIGSGAPVLAISGHMDVVDAGD HDDWTFPPFELTDKDGKLFGRGTTDMKGGLMAMVIAMIELKQSNALKQGTIRLLATTGEETEQYGAQLLADEGYLDDVSG LIIGEPTSNIAYYAHKGSMSCVVTAKGKAAHSSMPHLGTNAVDILVDFVNEMKQEYKNIKEHDKVHELDAVPMIEKHLHR KIGEEESHIYSGFVMLNSVFNGGKQVNSVPHKATAKYNVRTVPEYDSTFVKDLFEKVIRHVGENYLTVDIPSSHDPVASD RDNPLIQNITRIAPNYVHEDIVVSALIGTTDASSFLGTNENNVDFAVFGPGESIMAHQVDEFIRKDMYLSYIDVYKDVFK AYLEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 9e-67 | 43 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 3e-67 | 43 |
