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Name : choV (VV2_0002) Accession : NP_761992.1 Strain : Genome accession: NC_004460 Putative virulence/resistance : Unknown Product : choline ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 804 - 1997 bp Length : 1194 bp Strand : + Note : COG4175 DNA sequence : ATGGATGCCATTACAATTGAGAATGTTGATGTGGTTTTTGGCGATAAGCCAGAGCACGCTTTGGCGCTGCTCGATCAAGG TAAAACGCGCCAAGAAATCATTGATGAAGCAGGCCAAGTGGTGGGGGTGAACAAGGTTTCTCTCTCAATCAAAGAAGGCG AAATCTGTGTGTTGATGGGTTTGTCCGGTTCAGGTAAGTCGAGCTTATTGAGAGCGGTGAACGGCTTGAACAGCATTTCT CGTGGGTCGTTGCGTATAAAAGATGGGGACCAACAGGTCGACCTAGCGCAATGTGACGAAGCAACGTTAAGGCATTTACG AACGCATCGTGTTTCCATGGTTTTCCAAAAGTTTGCGCTGATGCCTTGGCTCACGGTGCTCGACAATGTTGCGTTTGGCC TAGAAATGCAAGGTATGGCGAAAAAGCAACGCCGTAAAAAAGCCAAAGAACAGCTTGAAATGGTGGGGCTTTCGGAATGG CAGGATAAGTATCCACATGAACTGTCGGGAGGCATGCAGCAACGTGTTGGCCTAGCGAGAGCGTTCGCGATGGACACCGA TATTCTCTTGATGGACGAACCTTTTTCCGCCCTAGATCCGTTGATTCGCGCTCAGTTACAAGATGAGCTGATTCAACTGC AGAAAAAAATGAACAAAACCATTCTCTTTGTCAGCCATGATTTAGACGAAGCGCTAAAAATTGGCAACAATATTGCGATC ATGGAATCCGGATGCTTGATACAGCATGGCGCGCCAGAAGAGATTGTGTTGTCTCCAGAAACCGATTATGTGAAGGATTT CGTGGCCCACACCAATCCTCTCAATGTTCTGAAAGGTCGTACTTTGATGCTCAGCAAAGAATCATTGACGCAGACTGATG GCGCATGGCAAGTGTGTGGTAGGCAGGATTTGTGGTTGGAGCAGTCGGACCAGCAGATGACATTACGCAATTCAGATAAG CGCCTGCTGGCTTGGCCTTGTGAGCAGCAAGATCCTGTGGTTGATGACAATGTGCTTCTTGTCGCTTCACCCGATCTGGA TATGCGCGAGATGATCGCGTTGAAAAAGAAAAATAGGCAGCCGATTTTGTTGGCAGAAGATGATCAATTTGTTGGCGTGC TCGATACGGAACATATCTATCAGGCATTGCTTGGAAACTACCAAAGCAGCGCATCGGCGAATGGCTTGGCGTAG Protein sequence : MDAITIENVDVVFGDKPEHALALLDQGKTRQEIIDEAGQVVGVNKVSLSIKEGEICVLMGLSGSGKSSLLRAVNGLNSIS RGSLRIKDGDQQVDLAQCDEATLRHLRTHRVSMVFQKFALMPWLTVLDNVAFGLEMQGMAKKQRRKKAKEQLEMVGLSEW QDKYPHELSGGMQQRVGLARAFAMDTDILLMDEPFSALDPLIRAQLQDELIQLQKKMNKTILFVSHDLDEALKIGNNIAI MESGCLIQHGAPEEIVLSPETDYVKDFVAHTNPLNVLKGRTLMLSKESLTQTDGAWQVCGRQDLWLEQSDQQMTLRNSDK RLLAWPCEQQDPVVDDNVLLVASPDLDMREMIALKKKNRQPILLAEDDQFVGVLDTEHIYQALLGNYQSSASANGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 1e-51 | 47 |
