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Name : gspD (VV1_0877) Accession : NP_759853.1 Strain : Genome accession: NC_004459 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 884417 - 886438 bp Length : 2022 bp Strand : - Note : COG1450 DNA sequence : GTGAAACATTGGTTTAGCAAAAGCGCTTGGTTACTCGCAGGTACCTTAGCCTGCTCAAGCGGCGTGCTGGCAAACGAGTT TAGTGCAAGCTTTAAAGGCACCGATATTCAAGAGTTCATCAATATTGTCGGTCGAAACTTAGAAAAGACCATCATTGTCG ACCCTTCGGTGCGAGGCAAAATTGATGTACGCAGCTACGACGTATTAAATGAAGAGCAGTACTACAGCTTTTTCCTAAAC GTACTTGAAGTGTATGGCTACGCGGTGGTTGAAATGGAAAATGGCGTACTGAAAGTCGTCAAATCCAAAGATTCCAAAAC CTCCGCCATTCCCGTGGTCAGTGATGACACCGTGAAGGGCGACAATGTCATTACACGCGTGGTTGCGGTGCGCAATGTCT CCGTGCGAGAGCTGTCTCCTTTGCTACGCCAACTGATTGATAATGCGGGCGCTGGTAACGTGGTGCACTATGATCCGGCC AATATCATCTTGATCACGGGCCGTGCAGCGGTGGTGAATCGTTTGGCAGAAATCATCAAACGTGTGGACCAAGCGGGCGA TACCGAAATCGAAGTGGTAGAGCTAGGTAATGCGTCGGCGGCGGAAATGGTCCGTATTGTTGATGCGCTAAACCGCACTA CCGATGCGAAAAACACCCCAGAATTTTTGCAGCCAAAATTGGTGGCCGATGAGCGCACCAACTCGATTTTGATTTCGGGT GATCCCAAAGTGCGTGATCGCTTGAAGCGTTTGATTCGCCAACTTGATGTGGAAATGGCGAGCAAAGGCAACAACCGTGT TGTTTACCTCAAGTACGCCAAAGCGGAAGACTTAGTCGACGTATTGAAAGGGGTCTCAGACAACTTACAAGCAGAGAAAA ACTCTGGTCAAAAGGGCGCGTCTTCACAGCGCAACGATGTGGTGATCGCCGCGCATCAAGGCACCAACTCACTGGTATTG ACTGCGCCACCCGATATTATGTTGGCGCTGCAAGATGTGATTACCCAGTTAGATATTCGCCGTGCACAAGTGCTGATTGA AGCCTTGATTGTCGAAATGGCAGAGGGCGATGGTGTGAACTTGGGTGTGCAATGGGGTAACCTGGAAACGGGTGCGATGA TCCAGTACAGTAATACAGGGGCATCGATTGGCCAAGTAATGATTGGTCTAGAGGAAGCAAAGGATACAACTAAGACTGAA AGCCGTTGGGATCCAGATAAAAATCAGTGGGTGGATCGTCAGTACACTGAAAAAGGGGACTATTCAACACTGGCTTCTGC ATTGTCTAAGGTCAATGGCGCGGCCCTCAGTGTCGTGATGGGTGACTGGACGGCGTTGATTAGCGCGGTATCGAGTGATT CCAACTCAAATATCCTGTCTTCCCCAAGTATTACCGTAATGGATAACGGTGAAGCCTCATTTATTGTGGGTGAAGAAGTA CCGGTCATCACAGGCTCCACAGCGGGGTCCAATAACGACAACCCATTCCAAACCGTTGACCGCAAAGAAGTGGGCATCAA GCTTAAAGTGGTGCCACAAATTAACGAAGGCGACTCGGTTCAACTGAATATTGAACAGGAAGTGTCAAACGTTTTGGGTG CCAATGGCGCGGTGGACGTACGTTTTGCTAAGCGTCAGCTCAATACCTCGGTGATTGTGCAAGATGGCCAAATGTTGGTG CTCGGCGGCTTGATTGATGAACGTGCGCTAGAGAGTGAATCAAAAGTGCCACTGCTAGGGGATATTCCCGTGCTGGGGCA TTTGTTTAAATCAACCAATACTCAAGTTGAAAAGAAAAACCTGATGGTGTTCATCAAGCCAACTATCATTCGTGATGGCA TGACGGCCGATGGTATTACCCAGCGTAAGTACAACTACATTCGCGCCGAACAGCTTTACAAAGCGGATCAGGGCCTTAAA TTGATGGATGATGGCCACATTCCTGTGTTGCCGAAATTTGGTGAAGACAAACGCCATCCGGCTGAAATTCAAGCCTTTAT CGATCAAATGGAACAGCAGTAA Protein sequence : MKHWFSKSAWLLAGTLACSSGVLANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEEQYYSFFLN VLEVYGYAVVEMENGVLKVVKSKDSKTSAIPVVSDDTVKGDNVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPA NIILITGRAAVVNRLAEIIKRVDQAGDTEIEVVELGNASAAEMVRIVDALNRTTDAKNTPEFLQPKLVADERTNSILISG DPKVRDRLKRLIRQLDVEMASKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKNSGQKGASSQRNDVVIAAHQGTNSLVL TAPPDIMLALQDVITQLDIRRAQVLIEALIVEMAEGDGVNLGVQWGNLETGAMIQYSNTGASIGQVMIGLEEAKDTTKTE SRWDPDKNQWVDRQYTEKGDYSTLASALSKVNGAALSVVMGDWTALISAVSSDSNSNILSSPSITVMDNGEASFIVGEEV PVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDVRFAKRQLNTSVIVQDGQMLV LGGLIDERALESESKVPLLGDIPVLGHLFKSTNTQVEKKNLMVFIKPTIIRDGMTADGITQRKYNYIRAEQLYKADQGLK LMDDGHIPVLPKFGEDKRHPAEIQAFIDQMEQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-157 | 55 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 4e-166 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspD | NP_759853.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-153 | 54 |
