|
Name : gspE (VV1_0876) Accession : NP_759852.1 Strain : Genome accession: NC_004459 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 882918 - 884417 bp Length : 1500 bp Strand : - Note : COG2804 DNA sequence : ATGGTAGATATACTGGATACGGCGCCATCGTATCGCCGTTTACCGTTTAGTTTTGCTAACCGCTTTAAAATGGTGCTGGA AGTCGAGCACCCAGAAAGGCCGCCGGTACTTTACTACGTTGAGCCTCTCAATGCGCAGGCGTTAGTTGAAGTGCGTCGTG TGCTCAAACAGACGTTTGTCCCTCAAGCCATTGCCGCTGAAGCGTTTGAAAAAAAACTGACCGAAGCGTACCAACGCGAC TCGTCAGAAGCGCGTCAGCTGATGGAGGACATTGGCTCGGATGATGACTTCTTCTCTTTGGCTGAAGAGTTGCCGCAAGA TGAAGATTTGCTCGAAACGGAAGACGATGCGCCGATCATCAAATTGATCAACGCCATGTTGGGCGAAGCGATCAAAGAAG GGGCGTCGGATATTCACATCGAAACGTTCGAGAAAATTCTGTCGATTCGTTTCCGCGTCGATGGCGTTTTGCGCGATGTA CTGTCTCCGAGTCGCAAACTGGCGCCGCTGTTGGTGTCACGTGTTAAAGTTATGGCCAAACTGGATATTGCAGAAAAACG TGTGCCACAAGATGGCCGTATTTCACTGCGTATCGGTGGTCGCGCTGTCGATGTGCGTGTATCGACCATGCCTTCATCAC ACGGCGAGCGTGTGGTGATGCGTTTGCTGGATAAAAACGCCACTCGTCTTGACCTGCATAGCCTAGGCATGACACCGGTG AACCACGACAATTTCCGTCATCTTATCTCGCGTCCTCACGGCATTATCTTGGTCACAGGTCCAACGGGTTCGGGTAAATC CACCACCTTGTACGCTGGCCTGCAAGAGCTGAACAGCAACGAGCGCAACATCTTAACGGTGGAAGACCCGATCGAATTTG ATATTGATGGTATCGGCCAAACCCAAGTGAACCCAAAAGTCGACATGACCTTTGCTCGTGGTCTGCGAGCCATTTTGCGT CAAGACCCAGACGTGGTGATGGTCGGGGAAATTCGTGACTTGGAAACCGCGCAAATTGCCGTACAAGCGTCATTGACCGG TCACTTGGTGATGTCAACCTTGCACACCAACACCGCCGTAGGTGCAATTACCCGTCTGCGTGACATGGGCATTGAGCCCT TTTTGATCTCTTCTTCACTGCTGGGCGTGCTGGCTCAGCGCCTGGTACGGACTTTATGCCAAGACTGTAAAGAACCGTAC GAGGCGGACAAAGAGCAGCGCAAACTGTTTGGCGCGAAGAAGAAAGATGCGCTGACCTTATATCGTGCCAAGGGATGTGA AAAATGTAACCACAAAGGTTATCGTGGCCGTACCGGTATCCATGAGCTGTTGATGGTGGACGATAAAGTTCAAGAGCTGA TCCATGCTGAAGCGGGAGAGCAGGCGATGGACAAATACATTCGTGAACATACCCCGAGCATTCGCAGCGACGGTTTAGAC AAAGTGTTGCAAGGCGTGACGTCACTGGAAGAAGTGATGCGCGTGACCAAGGAATCTTAA Protein sequence : MVDILDTAPSYRRLPFSFANRFKMVLEVEHPERPPVLYYVEPLNAQALVEVRRVLKQTFVPQAIAAEAFEKKLTEAYQRD SSEARQLMEDIGSDDDFFSLAEELPQDEDLLETEDDAPIIKLINAMLGEAIKEGASDIHIETFEKILSIRFRVDGVLRDV LSPSRKLAPLLVSRVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTPV NHDNFRHLISRPHGIILVTGPTGSGKSTTLYAGLQELNSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILR QDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCQDCKEPY EADKEQRKLFGAKKKDALTLYRAKGCEKCNHKGYRGRTGIHELLMVDDKVQELIHAEAGEQAMDKYIREHTPSIRSDGLD KVLQGVTSLEEVMRVTKES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-167 | 67 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-167 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | NP_759852.1 | general secretory pathway protein E | VFG0182 | Protein | 4e-146 | 68 |
| gspE | NP_759852.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-165 | 66 |
| gspE | NP_759852.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-135 | 58 |
| gspE | NP_759852.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-77 | 46 |
| gspE | NP_759852.1 | general secretory pathway protein E | VFG0112 | Protein | 5e-90 | 46 |
| gspE | NP_759852.1 | general secretory pathway protein E | VFG0233 | Protein | 1e-84 | 46 |
