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Name : gspF (VV1_0875) Accession : NP_759851.1 Strain : Genome accession: NC_004459 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 881701 - 882918 bp Length : 1218 bp Strand : - Note : COG1459 DNA sequence : ATGGCGGCGTTTGAATACAAAGCGCTCGACGCAAAAGGGCGCACCAAAAAAGGCACCTTGGAAGGCGACAATGCCCGCCA AGTACGCCAACGCTTGAAAGAGCAAGGCATGGTGCCCATCGAGGTGATGGAAACCAAAGCCAAGTTGGCCAAAAGCAAAT CGTCAGGTGGCTTTAAGCGGGGCATTTCCACTCCCGAACTGTCGTTGATTACTCGTCAGATCTCGACCCTGGTGCAATCG GGTATGCCGCTGGAGGAGTGTCTCAAAGCGGTATCCGATCAAGCAGAGAAGCCTCGTATTCGAGGTATGTTGGCAGCGGT GCGGGCCAAAGTCACCGAAGGTTACACCTTGGCAGACAGCCTGTCAGACTACCCGCATATTTTTGATGAACTGTATCGCT CTATGGTGGCGGCAGGGGAAAAATCGGGTCATTTGGATGCGGTGTTAGAGCGCTTGGCCGATTACTGTGAAAATCGCCAG AAGATGCGTTCTAAGTTACTGCAAGCGATGATTTACCCGGTGGTATTGGTGGTGTTTGCTGTCACGATTGTGGCGTTTTT GCTCGCCACAGTGGTACCCAAAATCGTCGAGCCGATCATCCAAATGGGTCAAGAGCTGCCACAGTCGACGCAATTTTTAT TGGCGGCGAGTGAGTTTGTTCAAGAGTGGGGATTATTGCTGTTGGGAAGCATCGTGTTTGCCATTTACCTACTCAAAACG GCCTTGAAAAAGCCCAATGTTCGCATGGCGTGGGATCGCCGCATACTGAGCCTGCCGCTACTGGGCAAAATCTCGAAAGG GTTGAACACCGCTCGATTTGCTCGCACCTTATCCATTTGTACCTCCAGTGCGATTCCCATTTTGGAAGGGATGCGTGTGG CGGTCGATGTGATGTCGAACCAATTCGTCAAACAACAGGTCTTATTGGCGGCAGACAGTGTGCGTGAAGGGGCCAGTCTG CGTAAAGCTTTGGATCAAACTCGCCTTTTTCCACCAATGATGTTGCACATGATTGCCAGTGGAGAACAAAGTGGTGAGTT GGAAAGCATGCTGACGCGTGCCGCGGACAACCAAGATCAAAGTTTTGAATCGACGGTCAATATCGCGTTGGGTATTTTTA CCCCAGCGTTGATTGCGCTAATGGCGGGATTGGTGTTGTTCATTGTGATGGCGACACTGATGCCGATGCTGGAAATGAAT AATTTAATGAGTGGCTGA Protein sequence : MAAFEYKALDAKGRTKKGTLEGDNARQVRQRLKEQGMVPIEVMETKAKLAKSKSSGGFKRGISTPELSLITRQISTLVQS GMPLEECLKAVSDQAEKPRIRGMLAAVRAKVTEGYTLADSLSDYPHIFDELYRSMVAAGEKSGHLDAVLERLADYCENRQ KMRSKLLQAMIYPVVLVVFAVTIVAFLLATVVPKIVEPIIQMGQELPQSTQFLLAASEFVQEWGLLLLGSIVFAIYLLKT ALKKPNVRMAWDRRILSLPLLGKISKGLNTARFARTLSICTSSAIPILEGMRVAVDVMSNQFVKQQVLLAADSVREGASL RKALDQTRLFPPMMLHMIASGEQSGELESMLTRAADNQDQSFESTVNIALGIFTPALIALMAGLVLFIVMATLMPMLEMN NLMSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 8e-95 | 52 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-93 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | NP_759851.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-90 | 51 |
| gspF | NP_759851.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-84 | 47 |
